RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 P2RX7Q99572 595 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 RPAP3Q9H6T3 665 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 ISY1Q9ULR0 285 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
TRAPPC12-222ENST00000493792 ZNF213O14771 459 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 HOXA7P31268 230 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 HERVK_113P62684 666 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 TRIM32Q13049 653 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 CCAR1Q8IX12 1150 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 CEP95Q96GE4 821 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 DSCC1Q9BVC3 393 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 CWC22Q9HCG8 908 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 RAD50Q92878 1312 aa12.32□□□□□ -0.44
TRAPPC12-222ENST00000493792 IMMTQ16891 758 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 MFSD6Q6ZSS7 791 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 NEDD1Q8NHV4 660 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 CHMP4CQ96CF2 233 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 IL25Q9H293 177 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 ZMYM6O95789 1325 aa12.31□□□□□ -0.44
TRAPPC12-222ENST00000493792 LAMA2P24043 3122 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 PEX10O60683 326 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 FLOT1O75955 427 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 TTLL1O95922 423 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 KIAA1755Q5JYT7 1200 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 CASC1Q6TDU7 716 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 LPAR1Q92633 364 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 COA7Q96BR5 231 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 GUCD1Q96NT3 240 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 STX8Q9UNK0 236 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 MTMR7Q9Y216 660 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 SPTBN5Q9NRC6 3674 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
TRAPPC12-222ENST00000493792 WDR46O15213 610 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 SGSM2O43147 1006 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 ORC4O43929 436 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 COG2Q14746 738 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 GPRC5AQ8NFJ5 357 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 STAG1Q8WVM7 1258 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 UBE2OQ9C0C9 1292 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 TACC3Q9Y6A5 838 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 PFASO15067 1338 aa12.29□□□□□ -0.44
TRAPPC12-222ENST00000493792 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 F5H6K3 240 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 NMT2O60551 498 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 NDUFB10O96000 172 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 HMGCRP04035 888 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 COL6A1P12109 1028 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 PTH1RQ03431 593 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 KLRC3Q07444 240 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 PLS1Q14651 629 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 ESR2Q92731 530 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 TXNRD2Q9NNW7 524 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 HOXC10Q9NYD6 342 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 MYH4Q9Y623 1939 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 DOCK3Q8IZD9 2030 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 PLIN4Q96Q06 1357 aa12.28□□□□□ -0.44
TRAPPC12-222ENST00000493792 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-222ENST00000493792 KDM4AO75164 1064 aa12.27□□□□□ -0.45
TRAPPC12-222ENST00000493792 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-222ENST00000493792 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
TRAPPC12-222ENST00000493792 ERVK-24P63145 666 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms