RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 ARRDC4Q8NCT1 418 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-210ENST00000493613 EYSQ5T1H1 3165 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 A0A0C4DFX4 3053 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 SEPT4O43236 478 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 RAD21O60216 631 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 ANO1Q5XXA6 986 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 DEFB123Q8N688 67 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
NUDCD3-210ENST00000493613 SLC25A27O95847 323 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 Q7L0L9 218 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 STRBPQ96SI9 672 aaKnown RBP12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 LBHD1Q9BQE6 289 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
NUDCD3-210ENST00000493613 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 VWA5AO00534 786 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 RTP1P59025 263 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 SBK1Q52WX2 424 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 FAM83BQ5T0W9 1011 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 KBTBD3Q8NAB2 608 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 MMP19Q99542 508 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 ATP11BQ9Y2G3 1177 aa12.3□□□□□ -0.44
NUDCD3-210ENST00000493613 MINDY4BA8MYZ0 360 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 PGK2P07205 417 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 RASA1P20936 1047 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 STAT3P40763 770 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 KCTD2Q14681 263 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 GIMAP6Q6P9H5 292 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 SLC39A5Q6ZMH5 540 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 APPBP2Q92624 585 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 OSBP2Q969R2 916 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 ZNF214Q9UL59 606 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-210ENST00000493613 RNF113AO15541 343 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 COPB2P35606 906 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 ADCYAP1R1P41586 468 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 LRRC41Q15345 812 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 FAM47AQ5JRC9 791 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 XPNPEP3Q9NQH7 507 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
NUDCD3-210ENST00000493613 CDH23Q9H251 3354 aa12.27□□□□□ -0.44
NUDCD3-210ENST00000493613 F5H6K3 240 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 GPAA1O43292 621 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 APPP05067 770 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 RARBP10826 455 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 GNAT2P19087 354 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 TDO2P48775 406 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 KLRC3Q07444 240 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 SNX17Q15036 470 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF792Q3KQV3 632 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 TRIM60Q495X7 471 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 EPB41L4AQ9HCS5 686 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 PRDM5Q9NQX1 630 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 MTMR10Q9NXD2 777 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 LCTP09848 1927 aa12.27□□□□□ -0.45
NUDCD3-210ENST00000493613 M0R2C6 588 aa12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 SNRNP48Q6IEG0 339 aaKnown RBP12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF444Q8N0Y2 327 aaPredicted RBP12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 PRPF38AQ8NAV1 312 aaKnown RBP12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 STXBP5LQ9Y2K9 1186 aa12.26□□□□□ -0.45
NUDCD3-210ENST00000493613 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 PRDM1O75626 825 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 NDUFB10O96000 172 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 PGK1P00558 417 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms