RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 MLLT1Q03111 559 aaPredicted RBP16.21■□□□□ 0.19
PDCD11-206ENST00000493610 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 GMCL1P1Q8NEA9 526 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 STAG1Q8WVM7 1258 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 TRIB2Q92519 343 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 PPP1R9AQ9ULJ8 1098 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 SYNPO2Q9UMS6 1093 aa16.21■□□□□ 0.19
PDCD11-206ENST00000493610 NEDD4P46934 1319 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 HIP1O00291 1037 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 INHAP05111 366 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
PDCD11-206ENST00000493610 CCL5P13501 91 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 PTPREP23469 700 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 CCL14Q16627 93 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 SPATC1LQ9H0A9 340 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
PDCD11-206ENST00000493610 ZNF214Q9UL59 606 aaPredicted RBP16.2■□□□□ 0.18
PDCD11-206ENST00000493610 VWA5AO00534 786 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 CYP2B6P20813 491 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 PTH1RQ03431 593 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 GRB14Q14449 540 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 MAP3K21Q5TCX8 1036 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
PDCD11-206ENST00000493610 TCP11L1Q9NUJ3 509 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
PDCD11-206ENST00000493610 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
PDCD11-206ENST00000493610 TSPY2A6NKD2 308 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
PDCD11-206ENST00000493610 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
PDCD11-206ENST00000493610 ERCC3P19447 782 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 NPLOC4Q8TAT6 608 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 SOCS4Q8WXH5 440 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
PDCD11-206ENST00000493610 PAK6Q9NQU5 681 aaPredicted RBP16.18■□□□□ 0.18
PDCD11-206ENST00000493610 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 SGSM2O43147 1006 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 HOXC6P09630 235 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 MFAP1P55081 439 aaKnown RBP16.17■□□□□ 0.18
PDCD11-206ENST00000493610 MAP2K5Q13163 448 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 SLFN13Q68D06 897 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 RIPK3Q9Y572 518 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 RAD50Q92878 1312 aa16.17■□□□□ 0.18
PDCD11-206ENST00000493610 COBLO75128 1261 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 HMGCRP04035 888 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 GJB1P08034 283 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 GJA8P48165 433 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 CCNA1P78396 465 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
PDCD11-206ENST00000493610 RIOX2Q8IUF8 465 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 GMCL1Q96IK5 515 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 TMEM106CQ9BVX2 250 aa16.16■□□□□ 0.18
PDCD11-206ENST00000493610 SMCHD1A6NHR9 2005 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 RAD21O60216 631 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
PDCD11-206ENST00000493610 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
PDCD11-206ENST00000493610 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 APBA2Q99767 749 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 TMEM47Q9BQJ4 181 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 RNF208Q9H0X6 261 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 ZNF536O15090 1300 aa16.15■□□□□ 0.18
PDCD11-206ENST00000493610 ZNF213O14771 459 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 ATP2A1O14983 1001 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 BMP3P12645 472 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 MCCP23508 829 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 ADORA2AP29274 412 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 RGS2P41220 211 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 UBXN2AP68543 259 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
PDCD11-206ENST00000493610 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 FRMPD3Q5JV73 1810 aa16.14■□□□□ 0.17
PDCD11-206ENST00000493610 B4E1Z4 1266 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 PLA2G6O60733 806 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 CYP21A2P08686 494 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 STAT3P40763 770 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 PLS1Q14651 629 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 STOX1Q6ZVD7 989 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
PDCD11-206ENST00000493610 TRPV1Q8NER1 839 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms