RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 KRT26Q7Z3Y9 468 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 HOMER1Q86YM7 354 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 ANKS1AQ92625 1134 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 RNF26Q9BY78 433 aaPredicted RBP9.31□□□□□ -0.92
FDPS-218ENST00000492887 TAF1DQ9H5J8 278 aaPredicted RBP9.31□□□□□ -0.92
FDPS-218ENST00000492887 ZNF408Q9H9D4 720 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 AS3MTQ9HBK9 375 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 PICK1Q9NRD5 415 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
FDPS-218ENST00000492887 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
FDPS-218ENST00000492887 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
FDPS-218ENST00000492887 hCG_1642624A0A1W2PR95 340 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 BRD1O95696 1058 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 PDHBP11177 359 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 RRP1BQ14684 758 aaKnown RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 KCTD1Q719H9 257 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 CCDC84Q86UT8 332 aaPredicted RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 METTL16Q86W50 562 aaKnown RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 DCAF4Q8WV16 495 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 TEPSINQ96N21 525 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 AIFM3Q96NN9 605 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 LZTS2Q9BRK4 669 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
FDPS-218ENST00000492887 BRMS1Q9HCU9 246 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
FDPS-218ENST00000492887 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
FDPS-218ENST00000492887 LOC285556D6RIA3 1793 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 SSC5DA1L4H1 1573 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 PRPF3O43395 683 aaKnown RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 INPP5BP32019 993 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 GUCY1A2P33402 732 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 IREB2P48200 963 aaKnown RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 NTRK3Q16288 839 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 GPATCH4Q5T3I0 446 aaKnown RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 OTUD7BQ6GQQ9 843 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 SCYL3Q8IZE3 742 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 SRBD1Q8N5C6 995 aaKnown RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 CCDC148Q8NFR7 591 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 RRP36Q96EU6 259 aaKnown RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 CDCA5Q96FF9 252 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 GLIS2Q9BZE0 524 aaPredicted RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 UBA5Q9GZZ9 404 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 RRAGCQ9HB90 399 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 VPS54Q9P1Q0 977 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 CSADQ9Y600 493 aa9.29□□□□□ -0.92
FDPS-218ENST00000492887 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
FDPS-218ENST00000492887 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 FIBPO43427 364 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 CTNND1O60716 968 aaKnown RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 BAG4O95429 457 aaKnown RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 NDUFB10O96000 172 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 BMP3P12645 472 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 SCG2P13521 617 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 FDPSP14324 419 aaKnown RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 ECE1P42892 770 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 NLRP5P59047 1200 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 ZNF543Q08ER8 600 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 NFKBIBQ15653 356 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 KRT40Q6A162 431 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 HEATR3Q7Z4Q2 680 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 NBPF11Q86T75 865 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
FDPS-218ENST00000492887 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 GINM1Q9NU53 330 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
FDPS-218ENST00000492887 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
FDPS-218ENST00000492887 TMEM232C9JQI7 657 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 F5H6K3 240 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 UBE2Q2LH0YL09 131 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 VEGFAP15692 232 aaPredicted RBP9.27□□□□□ -0.93
FDPS-218ENST00000492887 PTMSP20962 102 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 KRT2P35908 639 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 SLC16A2P36021 539 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 NOVP48745 357 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 NAPAP54920 295 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 KRT85P78386 507 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 JAG1P78504 1218 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 KLRC3Q07444 240 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 CSPP1Q1MSJ5 1256 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 GMCL1P1Q8NEA9 526 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 ACER1Q8TDN7 264 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms