RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 ZNF236Q9UL36 1845 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 COBLO75128 1261 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 GNAT2P19087 354 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 FGD1P98174 961 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 SNX17Q15036 470 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 MSL3Q8N5Y2 521 aaKnown RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 MAML3Q96JK9 1138 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 STRBPQ96SI9 672 aaKnown RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 LBHD1Q9BQE6 289 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-212ENST00000492407 DCTPP1Q9H773 170 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 NYAP2Q9P242 653 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 PPP1R9AQ9ULJ8 1098 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 STXBP5LQ9Y2K9 1186 aa10.95□□□□□ -0.66
HDAC3-212ENST00000492407 VWA5AO00534 786 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 STAT3P40763 770 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 EVX2Q03828 476 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 PLS1Q14651 629 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 KCTD2Q14681 263 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 TMEM132BQ14DG7 1078 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 TMEM132AQ24JP5 1023 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 SLC39A5Q6ZMH5 540 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 DEFB123Q8N688 67 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 KBTBD3Q8NAB2 608 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 SLC17A8Q8NDX2 589 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 ATG4CQ96DT6 458 aa10.94□□□□□ -0.66
HDAC3-212ENST00000492407 PUS7LQ9H0K6 701 aaKnown RBP10.94□□□□□ -0.66
HDAC3-212ENST00000492407 ROBO3Q96MS0 1386 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 RTP1P59025 263 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 ZNF792Q3KQV3 632 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC3-212ENST00000492407 SPICE1Q8N0Z3 855 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 APPBP2Q92624 585 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 MKL1Q969V6 931 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 MMP19Q99542 508 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 TINF2Q9BSI4 451 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 MTMR10Q9NXD2 777 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 ALPK3Q96L96 1907 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
HDAC3-212ENST00000492407 A0A0G2JMZ2 1700 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 GSG1L2A8MUP6 293 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 RNF113AO15541 343 aaKnown RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 HMGB1P09429 215 aaKnown RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 FDX1P10109 184 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 LRRC41Q15345 812 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 GJC2Q5T442 439 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 RNF180Q86T96 592 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 PRPF38AQ8NAV1 312 aaKnown RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 REPS2Q8NFH8 660 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 TEX13BQ9BXU2 312 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 MKNK2Q9HBH9 465 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-212ENST00000492407 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
HDAC3-212ENST00000492407 TTC41PQ6P2S7 1318 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 F5H6K3 240 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 RARBP10826 455 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 AKR1A1P14550 325 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 RASA1P20936 1047 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 CDK11BP21127 795 aaKnown RBP10.91□□□□□ -0.66
HDAC3-212ENST00000492407 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-212ENST00000492407 OAZ1P54368 228 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 MDM2Q00987 491 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-212ENST00000492407 KLRC3Q07444 240 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 MAMDC4Q6UXC1 1216 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-212ENST00000492407 SLF1Q9BQI6 1058 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 XPNPEP3Q9NQH7 507 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 FBXO40Q9UH90 709 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
HDAC3-212ENST00000492407 SYNGAP1Q96PV0 1343 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 RLFQ13129 1914 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 IGKV6D-41A0A0C4DH26 115 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
HDAC3-212ENST00000492407 ERC2O15083 957 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 ZBED4O75132 1171 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 ADCYAP1R1P41586 468 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 FAM83BQ5T0W9 1011 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 TICAM2Q86XR7 235 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 CLEC10AQ8IUN9 316 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 ZNF444Q8N0Y2 327 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-212ENST00000492407 GMCL1P1Q8NEA9 526 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 OSBP2Q969R2 916 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 NACAP1Q9BZK3 213 aa10.9□□□□□ -0.66
HDAC3-212ENST00000492407 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms