RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	NUP88	Q99567	741 aa	Predicted RBP	11.37	□□□□□ -0.59
TRO-223	ENST00000492142	GOPC	Q9HD26	462 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	GPCPD1	Q9NPB8	672 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.37	□□□□□ -0.59
TRO-223	ENST00000492142	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	UNCX	A6NJT0	531 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	TMEM88B	A6NKF7	163 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	IRF6	O14896	467 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	PPFIA3	O75145	1194 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	PARP1	P09874	1014 aa	Known RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	PDHB	P11177	359 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	SLC1A4	P43007	532 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	HMGCS2	P54868	508 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	BACE1	P56817	501 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	MKRN3	Q13064	507 aa	Known RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	GRM4	Q14833	912 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	KCTD1	Q719H9	257 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	CMTR1	Q8N1G2	835 aa	Known RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	STAG2	Q8N3U4	1231 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	CCDC82	Q8N4S0	544 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	GMCL1P1	Q8NEA9	526 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	KIAA1683	Q9H0B3	1180 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	VCPKMT	Q9H867	229 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	EMILIN3	Q9NT22	766 aa		11.36	□□□□□ -0.59
TRO-223	ENST00000492142	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	DAXX	Q9UER7	740 aa	Predicted RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	ABT1	Q9ULW3	272 aa	Known RBP	11.36	□□□□□ -0.59
TRO-223	ENST00000492142	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.35	□□□□□ -0.59
TRO-223	ENST00000492142	C19orf81	C9J6K1	198 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	CPLX1	O14810	134 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	HSP90AA1	P07900	732 aa	Known RBP	11.35	□□□□□ -0.59
TRO-223	ENST00000492142	KIF5B	P33176	963 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	GJA5	P36382	358 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	ZNF157	P51786	506 aa	Predicted RBP	11.35	□□□□□ -0.59
TRO-223	ENST00000492142	ST3GAL1	Q11201	340 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	PPIL2	Q13356	520 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	FAM83B	Q5T0W9	1011 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	TTBK2	Q6IQ55	1244 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	SAPCD2	Q86UD0	394 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	DCAF4	Q8WV16	495 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	GTF3C6	Q969F1	213 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	WNK4	Q96J92	1243 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	UBA5	Q9GZZ9	404 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	TMOD4	Q9NZQ9	345 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	MAD2L2	Q9UI95	211 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	SYNPO2	Q9UMS6	1093 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	PHIP	Q8WWQ0	1821 aa		11.35	□□□□□ -0.59
TRO-223	ENST00000492142	CCDC196	A0A1B0GTZ2	297 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	PALM3	A6NDB9	673 aa	Predicted RBP	11.34	□□□□□ -0.59
TRO-223	ENST00000492142	KLRF2	D3W0D1	207 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	CXCL11	O14625	94 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	DHX16	O60231	1041 aa	Known RBP	11.34	□□□□□ -0.59
TRO-223	ENST00000492142	PLEKHA8P1	O95397	391 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	SNHG28	P0DPA3	235 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	BMP3	P12645	472 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	RCAN1	P53805	252 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	USP14	P54578	494 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	ZNF543	Q08ER8	600 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	CUL4A	Q13619	759 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	ASPRV1	Q53RT3	343 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	SPRYD7	Q5W111	196 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	RGMB	Q6NW40	437 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	GADL1	Q6ZQY3	521 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	PIBF1	Q8WXW3	757 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	GMCL1	Q96IK5	515 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	MAP3K14	Q99558	947 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	CPVL	Q9H3G5	476 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	VAT1L	Q9HCJ6	419 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	RBM28	Q9NW13	759 aa	Known RBP	11.34	□□□□□ -0.59
TRO-223	ENST00000492142	TLL2	Q9Y6L7	1015 aa		11.34	□□□□□ -0.59
TRO-223	ENST00000492142	TMEM232	C9JQI7	657 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	JAK2	O60674	1132 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	CTDNEP1	O95476	244 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	VCAM1	P19320	739 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	SLC16A2	P36021	539 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	GNAQ	P50148	359 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	IK	Q13123	557 aa	Predicted RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	SNAPC2	Q13487	334 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	PPP2R5B	Q15173	497 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	SH3D19	Q5HYK7	790 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	CPLX2	Q6PUV4	134 aa	Known RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	TMTC3	Q6ZXV5	915 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	NBPF11	Q86T75	865 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	SRBD1	Q8N5C6	995 aa	Known RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	LPAR1	Q92633	364 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	PHKB	Q93100	1093 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	DDX11	Q96FC9	970 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	IPO9	Q96P70	1041 aa	Known RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	LZTS2	Q9BRK4	669 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.33	□□□□□ -0.6
TRO-223	ENST00000492142	KCNH4	Q9UQ05	1017 aa		11.33	□□□□□ -0.6
TRO-223	ENST00000492142		A0A0G2JLL6	359 aa	Predicted RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	hCG_1642624	A0A1W2PR95	340 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	APLP1	P51693	650 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	SSRP1	Q08945	709 aa	Known RBP	11.32	□□□□□ -0.6
TRO-223	ENST00000492142	GRM1	Q13255	1194 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	NTRK3	Q16288	839 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	SLC35G1	Q2M3R5	365 aa		11.32	□□□□□ -0.6
TRO-223	ENST00000492142	GPATCH4	Q5T3I0	446 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 1828.8 ms