RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 ERVK-9P63128 1117 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 ERVK-24P63145 666 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 SAMD1Q6SPF0 538 aaPredicted RBP27.42■■□□□ 1.98
CPNE9-204ENST00000491802 CNNM2Q9H8M5 875 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 TCP11L1Q9NUJ3 509 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 FBXO28Q9NVF7 368 aa27.42■■□□□ 1.98
CPNE9-204ENST00000491802 CNMDO75829 334 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 IRF5Q13568 498 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 SLFN13Q68D06 897 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 COA7Q96BR5 231 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 KRT23Q9C075 422 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 PLXNB2O15031 1838 aa27.41■■□□□ 1.98
CPNE9-204ENST00000491802 CENPFP49454 3210 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 DSG3P32926 999 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 PRKCZQ05513 592 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 ATG4CQ96DT6 458 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 ZKSCAN3Q9BRR0 538 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 TAF6LQ9Y6J9 622 aa27.4■■□□□ 1.98
CPNE9-204ENST00000491802 MAPK4P31152 587 aa27.39■■□□□ 1.98
CPNE9-204ENST00000491802 RGS19P49795 217 aa27.39■■□□□ 1.98
CPNE9-204ENST00000491802 NBPF11Q86T75 865 aa27.39■■□□□ 1.98
CPNE9-204ENST00000491802 MB21D1Q8N884 522 aa27.39■■□□□ 1.98
CPNE9-204ENST00000491802 BTBD7Q9P203 1132 aa27.39■■□□□ 1.98
CPNE9-204ENST00000491802 CCNA1P78396 465 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 Q3C1V9 767 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 SLC9C1Q4G0N8 1177 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 IQCA1Q86XH1 822 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 CHMP4CQ96CF2 233 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 ZNF333Q96JL9 665 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 PPP1R9AQ9ULJ8 1098 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 ISY1Q9ULR0 285 aaKnown RBP27.38■■□□□ 1.97
CPNE9-204ENST00000491802 ADAMTS5Q9UNA0 930 aa27.38■■□□□ 1.97
CPNE9-204ENST00000491802 TOP1P11387 765 aaKnown RBP27.37■■□□□ 1.97
CPNE9-204ENST00000491802 TRDNQ13061 729 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 RCSD1Q6JBY9 416 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 RAET1EQ8TD07 263 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 PXYLP1Q8TE99 480 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 GMCL1Q96IK5 515 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 TMEM47Q9BQJ4 181 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 PORCNQ9H237 461 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 GABRQQ9UN88 632 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 MTMR7Q9Y216 660 aa27.37■■□□□ 1.97
CPNE9-204ENST00000491802 BMP3P12645 472 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 FLT3LGP49771 235 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 RASGRP2Q7LDG7 609 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 CCAR1Q8IX12 1150 aaKnown RBP27.36■■□□□ 1.97
CPNE9-204ENST00000491802 SLAIN1Q8ND83 568 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 SLF1Q9BQI6 1058 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 ZSWIM5Q9P217 1185 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 GJD2Q9UKL4 321 aa27.36■■□□□ 1.97
CPNE9-204ENST00000491802 COL11A1P12107 1806 aaPredicted RBP27.36■■□□□ 1.97
CPNE9-204ENST00000491802 KIAA0100Q14667 2235 aaKnown RBP27.35■■□□□ 1.97
CPNE9-204ENST00000491802 E7EWF7 191 aa27.35■■□□□ 1.97
CPNE9-204ENST00000491802 MCCP23508 829 aa27.35■■□□□ 1.97
CPNE9-204ENST00000491802 SLC1A4P43007 532 aa27.35■■□□□ 1.97
CPNE9-204ENST00000491802 STOX1Q6ZVD7 989 aa27.35■■□□□ 1.97
CPNE9-204ENST00000491802 RALYLQ86SE5 291 aaKnown RBP27.35■■□□□ 1.97
CPNE9-204ENST00000491802 TTC14Q96N46 770 aa27.35■■□□□ 1.97
CPNE9-204ENST00000491802 GRK4P32298 578 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 CCDC178Q5BJE1 867 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 SOCS4Q8WXH5 440 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 ZSCAN10Q96SZ4 725 aaPredicted RBP27.34■■□□□ 1.97
CPNE9-204ENST00000491802 UBAC1Q9BSL1 405 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 FEM1BQ9UK73 627 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 TNKSO95271 1327 aa27.34■■□□□ 1.97
CPNE9-204ENST00000491802 ZNF236Q9UL36 1845 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 SLC27A2O14975 620 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 CCDC96Q2M329 555 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 CREB3L3Q68CJ9 461 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 CYB5R4Q7L1T6 521 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 DGKHQ86XP1 1220 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 SHCBP1Q8NEM2 672 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 SPATC1LQ9H0A9 340 aa27.33■■□□□ 1.97
CPNE9-204ENST00000491802 CWC22Q9HCG8 908 aaKnown RBP27.33■■□□□ 1.97
CPNE9-204ENST00000491802 VWA5AO00534 786 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 PLS1Q14651 629 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 NECTIN1Q15223 517 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 WDR78Q5VTH9 848 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 ENAHQ8N8S7 591 aaPredicted RBP27.32■■□□□ 1.96
CPNE9-204ENST00000491802 PRPF38AQ8NAV1 312 aaKnown RBP27.32■■□□□ 1.96
CPNE9-204ENST00000491802 NCOA7Q8NI08 942 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 DCAF4Q8WV16 495 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 KIFC2Q96AC6 838 aa27.32■■□□□ 1.96
CPNE9-204ENST00000491802 MOV10L1Q9BXT6 1211 aaKnown RBP27.32■■□□□ 1.96
CPNE9-204ENST00000491802 TMEM232C9JQI7 657 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 ADCY3O60266 1144 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 XRCC5P13010 732 aaKnown RBP27.31■■□□□ 1.96
CPNE9-204ENST00000491802 STAT2P52630 851 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 IKQ13123 557 aaPredicted RBP27.31■■□□□ 1.96
CPNE9-204ENST00000491802 TMEM132BQ14DG7 1078 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 KCTD1Q719H9 257 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 GPR142Q7Z601 462 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 PLEKHH3Q7Z736 793 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 USP6NLQ92738 828 aa27.31■■□□□ 1.96
CPNE9-204ENST00000491802 REPS2Q8NFH8 660 aa27.3■■□□□ 1.96
CPNE9-204ENST00000491802 SH3TC2Q8TF17 1288 aa27.3■■□□□ 1.96
CPNE9-204ENST00000491802 NUDT12Q9BQG2 462 aa27.3■■□□□ 1.96
CPNE9-204ENST00000491802 PDHBP11177 359 aa27.29■■□□□ 1.96
CPNE9-204ENST00000491802 MORN1Q5T089 497 aa27.29■■□□□ 1.96
CPNE9-204ENST00000491802 FAM160B2Q86V87 743 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms