RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 STAT6P42226 847 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 GPR162Q16538 588 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
SNED1-211ENST00000491761 MINPP1Q9UNW1 487 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 LAMA4Q16363 1823 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 BAG3O95817 575 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 ITPK1Q13572 414 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 TMTC3Q6ZXV5 915 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 TAF4BQ92750 862 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 DDX41Q9UJV9 622 aaKnown RBP12.09□□□□□ -0.47
SNED1-211ENST00000491761 CTNND2Q9UQB3 1225 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 UBA7P41226 1012 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
SNED1-211ENST00000491761 DMTNQ08495 405 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 STAMQ92783 540 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNED1-211ENST00000491761 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 TRIM37O94972 964 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 USP8P40818 1118 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 MTIF2P46199 727 aaKnown RBP12.09□□□□□ -0.47
SNED1-211ENST00000491761 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
SNED1-211ENST00000491761 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNED1-211ENST00000491761 SF3A3Q12874 501 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNED1-211ENST00000491761 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 GDAP1L1Q96MZ0 367 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 LDHCP07864 332 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 SEC23AQ15436 765 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 PHF20Q9BVI0 1012 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
SNED1-211ENST00000491761 GLI3P10071 1580 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 KIF20AO95235 890 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 PAFAH1B1P43034 410 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 TRAPPC10P48553 1259 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 KCNQ4P56696 695 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 GSTO1P78417 241 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 UTP14CQ5TAP6 766 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 FAM84BQ96KN1 310 aaPredicted RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 MACROD2A1Z1Q3 448 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 FAM205CA6NFA0 338 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 ZEB2O60315 1214 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 ERLIN2O94905 339 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 MECOMQ03112 1051 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 SF3B3Q15393 1217 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 L2HGDHQ9H9P8 463 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
SNED1-211ENST00000491761 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 MAATS1Q7Z4T9 603 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 ADGRA1Q86SQ6 560 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 DESI2Q9BSY9 194 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 BLZF1Q9H2G9 400 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
SNED1-211ENST00000491761 TMCO5BA8MYB1 307 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 CCT6AP40227 531 aaKnown RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 SSR1P43307 286 aaKnown RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 GTF2A1P52655 376 aaPredicted RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 GUCA1BQ9UMX6 200 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 GOLGA6L10A0A0M3HER8 536 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 ZNF76P36508 570 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 TFAP4Q01664 338 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 IFFO1Q0D2I5 559 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 PAK1Q13153 545 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 MAP9Q49MG5 647 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 CELF1Q92879 486 aaKnown RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 RIOK1Q9BRS2 568 aaKnown RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 TACC3Q9Y6A5 838 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 EFCAB8A8MWE9 144 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
SNED1-211ENST00000491761 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 HEATR3Q7Z4Q2 680 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
SNED1-211ENST00000491761 AKR1B10O60218 316 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
SNED1-211ENST00000491761 BLIDQ8IZY5 108 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 PLIN2Q99541 437 aa12.06□□□□□ -0.48
SNED1-211ENST00000491761 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms