RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 LRP5O75197 1615 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 KDM2BQ8NHM5 1336 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 DOT1LQ8TEK3 1739 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 BCL9O00512 1426 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ANXA1P04083 346 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ARAFP10398 606 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 PCSK2P16519 638 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 NFKB1P19838 968 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 TARSP26639 723 aaKnown RBP5.62□□□□□ -1.51
CLIP4-211ENST00000491701 AMPD3Q01432 767 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 LAMC2Q13753 1193 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 CCINQ13939 588 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ERICH6BQ5W0A0 696 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ZNF790Q6PG37 636 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 SKAP1Q86WV1 359 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 TMEM57Q8N5G2 664 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 DDX54Q8TDD1 881 aaKnown RBP5.62□□□□□ -1.51
CLIP4-211ENST00000491701 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ARHGAP45Q92619 1136 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 PHAXQ9H814 394 aaKnown RBP5.62□□□□□ -1.51
CLIP4-211ENST00000491701 GGT7Q9UJ14 662 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
CLIP4-211ENST00000491701 RREB1Q92766 1687 aa5.62□□□□□ -1.51
CLIP4-211ENST00000491701 ABCC4O15439 1325 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 A6NHS1 94 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 BTBD11A6QL63 1104 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 RARAP10276 462 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 MZF1P28698 734 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 PAK2Q13177 524 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 FOXD4L6Q3SYB3 417 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 HSP90AB4PQ58FF6 505 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 INTS3Q68E01 1043 aaKnown RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 FOXD4L3Q6VB84 417 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 CHSY3Q70JA7 882 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 FMNL3Q8IVF7 1028 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 GPRASP2Q96D09 838 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 SRPK1Q96SB4 655 aaKnown RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 SLKQ9H2G2 1235 aaPredicted RBP5.61□□□□□ -1.51
CLIP4-211ENST00000491701 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 PPP4R2Q9NY27 417 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 KLF15Q9UIH9 416 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 POLIQ9UNA4 740 aa5.61□□□□□ -1.51
CLIP4-211ENST00000491701 CICQ96RK0 1608 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 EXOC5O00471 708 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 PDGFRBP09619 1106 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 MLLT1Q03111 559 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 CALD1Q05682 793 aaKnown RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 ITPK1Q13572 414 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 FAM182BQ5T319 152 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 ATF7IPQ6VMQ6 1270 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 APBB1IPQ7Z5R6 666 aaPredicted RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 RTF1Q92541 710 aaKnown RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 TRIM11Q96F44 468 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 GSX2Q9BZM3 304 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 UBA5Q9GZZ9 404 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 SIRPGQ9P1W8 387 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 FNDC3AQ9Y2H6 1198 aaKnown RBP5.6□□□□□ -1.51
CLIP4-211ENST00000491701 TAF1LQ8IZX4 1826 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 ADCY9O60503 1353 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 ZNF831Q5JPB2 1677 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 LAMB4A4D0S4 1761 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 PCDH11XQ9BZA7 1347 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
CLIP4-211ENST00000491701 LY75O60449 1722 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 NUP188Q5SRE5 1749 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 BTAF1O14981 1849 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 F6X3S4 739 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 CREB3O43889 395 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 A1BGP04217 495 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 HOXB7P09629 217 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 EIF4BP23588 611 aaKnown RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 ADH6P28332 368 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 GRNP28799 593 aaKnown RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 GATA4P43694 442 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 PIP4K2AP48426 406 aaPredicted RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 TBX4P57082 545 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 RSPO4Q2I0M5 234 aaPredicted RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 C1orf141Q5JVX7 400 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 ZNF468Q5VIY5 522 aaPredicted RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 ZKSCAN2Q63HK3 967 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 INTS5Q6P9B9 1019 aaKnown RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 ZNF438Q7Z4V0 828 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 AMIGO3Q86WK7 504 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 FCHSD1Q86WN1 690 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 JDP2Q8WYK2 163 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 KAZALD1Q96I82 304 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 TYW1Q9NV66 732 aaKnown RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 GEMIN8Q9NWZ8 242 aaKnown RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 NUP98P52948 1817 aa5.59□□□□□ -1.51
CLIP4-211ENST00000491701 COL5A3P25940 1745 aaPredicted RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 SOS1Q07889 1333 aaPredicted RBP5.59□□□□□ -1.51
CLIP4-211ENST00000491701 HMGB1P1B2RPK0 211 aaPredicted RBP5.58□□□□□ -1.52
CLIP4-211ENST00000491701 PDGFAP04085 211 aa5.58□□□□□ -1.52
CLIP4-211ENST00000491701 SSBP05455 408 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLIP4-211ENST00000491701 CYP19A1P11511 503 aaPredicted RBP5.58□□□□□ -1.52
CLIP4-211ENST00000491701 KCNQ4P56696 695 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms