RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 SPATC1LQ9H0A9 340 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 EPB41L4AQ9HCS5 686 aaPredicted RBP13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
TMEM39A-211ENST00000491685 GSG1L2A8MUP6 293 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 M0R2C6 588 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 COBLO75128 1261 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 FLOT1O75955 427 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 CYBAP13498 195 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 LRRC26Q2I0M4 334 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 KBTBD3Q8NAB2 608 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 LPAR1Q92633 364 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
TMEM39A-211ENST00000491685 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 RASA1P20936 1047 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 PLS1Q14651 629 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 OSBPL3Q9H4L5 887 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 HOXC10Q9NYD6 342 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 DDX20Q9UHI6 824 aaKnown RBP13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
TMEM39A-211ENST00000491685 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 GPAA1O43292 621 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 CNGA1P29973 690 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 SHCBP1Q8NEM2 672 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 APPBP2Q92624 585 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 MTMR10Q9NXD2 777 aa13.15□□□□□ -0.3
TMEM39A-211ENST00000491685 MCM3APO60318 1980 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 Q7L0L9 218 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 DPP9Q86TI2 863 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 REPS2Q8NFH8 660 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 KANSL2Q9H9L4 492 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 ADAMTS5Q9UNA0 930 aa13.14□□□□□ -0.31
TMEM39A-211ENST00000491685 RAD21O60216 631 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 OLFML2BQ68BL8 750 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 TDHQ8IZJ6 230 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 PPP1R9AQ9ULJ8 1098 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
TMEM39A-211ENST00000491685 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 HIP1O00291 1037 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 VWA5AO00534 786 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 STRNO43815 780 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 PRDM1O75626 825 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 PGK2P07205 417 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 GJC2Q5T442 439 aaPredicted RBP13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 MAML3Q96JK9 1138 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 SENP6Q9GZR1 1112 aaPredicted RBP13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 MROH8Q9H579 483 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
TMEM39A-211ENST00000491685 LCTP09848 1927 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 DNM1LO00429 736 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 FOXP2O15409 715 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 NDUFB10O96000 172 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 TDO2P48775 406 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 ABRAQ8N0Z2 381 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 MMP19Q99542 508 aa13.11□□□□□ -0.31
TMEM39A-211ENST00000491685 VCANP13611 3396 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms