RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PDE6AP16499 860 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 COL9A1P20849 921 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 TMEM179Q6ZVK1 233 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 RNF180Q86T96 592 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 AACSQ86V21 672 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 CRNKL1Q9BZJ0 848 aaKnown RBP18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 FBXO28Q9NVF7 368 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 XIRP2A4UGR9 3374 aa18.58■□□□□ 0.56
SCAMP3-208ENST00000490999 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 SIAH1Q8IUQ4 282 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 TIFAQ96CG3 184 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 TINF2Q9BSI4 451 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 ZNF576Q9H609 170 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
SCAMP3-208ENST00000490999 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 SYNRGQ9UMZ2 1314 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 TNFRSF10AO00220 468 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 ADAMTS4O75173 837 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 PBX2P40425 430 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 FAAP100Q0VG06 881 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 SLC9C2Q5TAH2 1124 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.56■□□□□ 0.567e-9■□□□□ 11.3
SCAMP3-208ENST00000490999 VCPKMTQ9H867 229 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 ARHGEF10LQ9HCE6 1279 aa18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 DCP1AQ9NPI6 582 aaPredicted RBP18.56■□□□□ 0.56
SCAMP3-208ENST00000490999 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 MYADML2A6NDP7 307 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 GRXCR1A8MXD5 290 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 ZNF865P0CJ78 1059 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 AKR1A1P14550 325 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 IRX5P78411 483 aaPredicted RBP18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 KCTD2Q14681 263 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 ARMT1Q9H993 441 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 STARD7Q9NQZ5 370 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 TMX2Q9Y320 296 aa18.55■□□□□ 0.56
SCAMP3-208ENST00000490999 PARP14Q460N5 1801 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 WDR46O15213 610 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 PRKAB2O43741 272 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 RAD21O60216 631 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 ZNF792Q3KQV3 632 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 PRDM12Q9H4Q4 367 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 NRBP1Q9UHY1 535 aa18.54■□□□□ 0.56
SCAMP3-208ENST00000490999 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 GOLIM4O00461 696 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 SLC25A27O95847 323 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 ACLYP53396 1101 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 PBX4Q9BYU1 374 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 SH2D4AQ9H788 454 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 TBX21Q9UL17 535 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 CHD7Q9P2D1 2997 aa18.53■□□□□ 0.56
SCAMP3-208ENST00000490999 COL11A1P12107 1806 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 TCRBV5S4A2TA0A5A2 114 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 DCDC2CA8MYV0 355 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 RLBP1P12271 317 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 CCDC129Q6ZRS4 1044 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 RIOX2Q8IUF8 465 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 ZNF214Q9UL59 606 aaPredicted RBP18.52■□□□□ 0.56
SCAMP3-208ENST00000490999 VWA5AO00534 786 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 MBD4O95243 580 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 EEF2P13639 858 aaKnown RBP18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 STAT3P40763 770 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 FAM83BQ5T0W9 1011 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 CEP85Q6P2H3 762 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 C16orf59Q7L2K0 433 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 PPP1R9AQ9ULJ8 1098 aa18.51■□□□□ 0.55
SCAMP3-208ENST00000490999 APBB1O00213 710 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 ADCY6O43306 1168 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 TIMP1P01033 207 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 CHGBP05060 677 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 ACRP10323 421 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 CSF2RAP15509 400 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 CCDC85BQ15834 202 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 KCNA10Q16322 511 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 TMED8Q6PL24 325 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 ADAMTS19Q8TE59 1207 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 GAS2L1Q99501 681 aaPredicted RBP18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 THEGQ9P2T0 379 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 ADAMTS5Q9UNA0 930 aa18.5■□□□□ 0.55
SCAMP3-208ENST00000490999 CDK8P49336 464 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 ADGRE1Q14246 886 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 TMEM240Q5SV17 173 aa18.49■□□□□ 0.55
SCAMP3-208ENST00000490999 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms