RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 CNMDO75829 334 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
FRAT1-202ENST00000490980 CCNA1P78396 465 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 COA7Q96BR5 231 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 TTC14Q96N46 770 aa16.6■□□□□ 0.25
FRAT1-202ENST00000490980 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
FRAT1-202ENST00000490980 BMP3P12645 472 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 MAPK4P31152 587 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 TRDNQ13061 729 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 Q3C1V9 767 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 ATG4CQ96DT6 458 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 SLF1Q9BQI6 1058 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 BTBD7Q9P203 1132 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 ADAMTS5Q9UNA0 930 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 PTCH2Q9Y6C5 1203 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
FRAT1-202ENST00000490980 PRKCZQ05513 592 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
FRAT1-202ENST00000490980 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
FRAT1-202ENST00000490980 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 FEM1BQ9UK73 627 aa16.58■□□□□ 0.24
FRAT1-202ENST00000490980 RBBP6Q7Z6E9 1792 aaKnown RBP16.58■□□□□ 0.24
FRAT1-202ENST00000490980 E7EWF7 191 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 SLC1A4P43007 532 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 PRPF38AQ8NAV1 312 aaKnown RBP16.57■□□□□ 0.24
FRAT1-202ENST00000490980 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
FRAT1-202ENST00000490980 PORCNQ9H237 461 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 GABRQQ9UN88 632 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 TAF6LQ9Y6J9 622 aa16.57■□□□□ 0.24
FRAT1-202ENST00000490980 TNKSO95271 1327 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 VWA5AO00534 786 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 MCCP23508 829 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 FLT3LGP49771 235 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 IRF5Q13568 498 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 NECTIN1Q15223 517 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
FRAT1-202ENST00000490980 NCOA7Q8NI08 942 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 DCAF4Q8WV16 495 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 ANKS1AQ92625 1134 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 UBAC1Q9BSL1 405 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
FRAT1-202ENST00000490980 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
FRAT1-202ENST00000490980 ISY1Q9ULR0 285 aaKnown RBP16.56■□□□□ 0.24
FRAT1-202ENST00000490980 ZNFX1Q9P2E3 1918 aaKnown RBP16.55■□□□□ 0.24
FRAT1-202ENST00000490980 CCDC85CA6NKD9 419 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 TMEM232C9JQI7 657 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 SLC27A2O14975 620 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 STAT2P52630 851 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 TMEM132BQ14DG7 1078 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 GPR142Q7Z601 462 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 PLEKHH3Q7Z736 793 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
FRAT1-202ENST00000490980 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
FRAT1-202ENST00000490980 MOV10L1Q9BXT6 1211 aaKnown RBP16.55■□□□□ 0.24
FRAT1-202ENST00000490980 PLA2G6O60733 806 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 PLS1Q14651 629 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 RASGRP2Q7LDG7 609 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 REPS2Q8NFH8 660 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 SOCS4Q8WXH5 440 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 CHMP4CQ96CF2 233 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 GJD2Q9UKL4 321 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 ZNF214Q9UL59 606 aaPredicted RBP16.54■□□□□ 0.24
FRAT1-202ENST00000490980 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
FRAT1-202ENST00000490980 PLXNA1Q9UIW2 1896 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 ZBED4O75132 1171 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 SLC25A27O95847 323 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 FDX1P10109 184 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 PDHBP11177 359 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 GRK4P32298 578 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 IKQ13123 557 aaPredicted RBP16.53■□□□□ 0.24
FRAT1-202ENST00000490980 SEC23AQ15436 765 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
FRAT1-202ENST00000490980 PNMA1Q8ND90 353 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms