RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 RPAP2Q8IXW5 612 aaPredicted RBP10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 MAML3Q96JK9 1138 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 FBXO28Q9NVF7 368 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 ATP11BQ9Y2G3 1177 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 TMX2Q9Y320 296 aa10.19□□□□□ -0.78
PCOLCE-209ENST00000490909 TRIM43BA6NCK2 446 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 ITGB8P26012 769 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 LRRC41Q15345 812 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 PRAMEF19Q5SWL8 479 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 C16orf86Q6ZW13 317 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 DPP9Q86TI2 863 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 TRIM43Q96BQ3 446 aaPredicted RBP10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 SWAP70Q9UH65 585 aa10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 ZNF214Q9UL59 606 aaPredicted RBP10.18□□□□□ -0.78
PCOLCE-209ENST00000490909 WDR46O15213 610 aaKnown RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 HMMRO75330 724 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 PGK2P07205 417 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 TAL1P17542 331 aaPredicted RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 PLS1Q14651 629 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 SHHQ15465 462 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 C12orf60Q5U649 245 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 FAM109BQ6ICB4 259 aaPredicted RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 SLC39A5Q6ZMH5 540 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 NCAPG2Q86XI2 1143 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 ABRAQ8N0Z2 381 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 CLASRPQ8N2M8 674 aaKnown RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 FERMT2Q96AC1 680 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 KIF1BPQ96EK5 621 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 CRBNQ96SW2 442 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 COL25A1Q9BXS0 654 aaPredicted RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 TTYH1Q9H313 450 aaPredicted RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 BOLA2Q9H3K6 86 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 PRDM5Q9NQX1 630 aaPredicted RBP10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 ADAMTS5Q9UNA0 930 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 XIRP2A4UGR9 3374 aa10.17□□□□□ -0.78
PCOLCE-209ENST00000490909 TRANK1O15050 2925 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 KBTBD13C9JR72 458 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 STRNO43815 780 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 IFIT2P09913 472 aaKnown RBP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 EEF2P13639 858 aaKnown RBP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 ADCYAP1R1P41586 468 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 CDK8P49336 464 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 EPHB4P54760 987 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 HSP90AB4PQ58FF6 505 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 BADQ92934 168 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 HAUS7Q99871 368 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 PUS7LQ9H0K6 701 aaKnown RBP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 MROH8Q9H579 483 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 EPB41L4AQ9HCS5 686 aaPredicted RBP10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 HOXC10Q9NYD6 342 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 PHF24Q9UPV7 400 aa10.16□□□□□ -0.78
PCOLCE-209ENST00000490909 USP17L12C9JPN9 530 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 USP17L21D6R901 530 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 VWA5AO00534 786 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ADCY6O43306 1168 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ZNF865P0CJ78 1059 aaPredicted RBP10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ATP5JP18859 108 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ZNF792Q3KQV3 632 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 FAM83BQ5T0W9 1011 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 CTR9Q6PD62 1173 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 FGD4Q96M96 766 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 NUP88Q99567 741 aaPredicted RBP10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 LBHD1Q9BQE6 289 aaPredicted RBP10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 XPNPEP3Q9NQH7 507 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 ATP8A2Q9NTI2 1148 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 PPP1R9AQ9ULJ8 1098 aa10.15□□□□□ -0.78
PCOLCE-209ENST00000490909 SYNRGQ9UMZ2 1314 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 A0A1W2PQ45 241 aaPredicted RBP10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 A0A1W2PQY0 241 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 MYADML2A6NDP7 307 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 SMARCA5O60264 1052 aaPredicted RBP10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 PGK1P00558 417 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 FCER1AP12319 257 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 RASA1P20936 1047 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 TLE2Q04725 743 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 UBE3CQ15386 1083 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 RIOX2Q8IUF8 465 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 ARRDC4Q8NCT1 418 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 MMP19Q99542 508 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 SH2D4AQ9H788 454 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 PRKAG2Q9UGJ0 569 aa10.14□□□□□ -0.79
PCOLCE-209ENST00000490909 BDP1A6H8Y1 2624 aa10.13□□□□□ -0.79
PCOLCE-209ENST00000490909 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
PCOLCE-209ENST00000490909 IGKV6D-41A0A0C4DH26 115 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms