RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PLEKHM2Q8IWE5 1019 aa37.33■■■■□ 3.57
LDB1-204ENST00000490751 SHCBP1Q8NEM2 672 aa37.33■■■■□ 3.57
LDB1-204ENST00000490751 CEP95Q96GE4 821 aa37.33■■■■□ 3.57
LDB1-204ENST00000490751 CLIP2Q9UDT6 1046 aa37.33■■■■□ 3.57
LDB1-204ENST00000490751 ZNF236Q9UL36 1845 aa37.33■■■■□ 3.57
LDB1-204ENST00000490751 PLIN4Q96Q06 1357 aa37.32■■■■□ 3.57
LDB1-204ENST00000490751 ERCC3P19447 782 aa37.32■■■■□ 3.56
LDB1-204ENST00000490751 RILPL2Q969X0 211 aa37.32■■■■□ 3.56
LDB1-204ENST00000490751 F5H6K3 240 aa37.31■■■■□ 3.56
LDB1-204ENST00000490751 TSPY3P0CV98 308 aa37.31■■■■□ 3.56
LDB1-204ENST00000490751 TSPY8P0CW00 308 aa37.31■■■■□ 3.56
LDB1-204ENST00000490751 KLRC3Q07444 240 aa37.31■■■■□ 3.56
LDB1-204ENST00000490751 CACNB2Q08289 660 aaPredicted RBP37.31■■■■□ 3.56
LDB1-204ENST00000490751 MCMDC2Q4G0Z9 681 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 NEDD1Q8NHV4 660 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 NUP88Q99567 741 aaPredicted RBP37.3■■■■□ 3.56
LDB1-204ENST00000490751 OSBPL3Q9H4L5 887 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 MTMR4Q9NYA4 1195 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 PPP1R9AQ9ULJ8 1098 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 ADAMTS5Q9UNA0 930 aa37.3■■■■□ 3.56
LDB1-204ENST00000490751 NDUFB10O96000 172 aa37.29■■■■□ 3.56
LDB1-204ENST00000490751 HOXC6P09630 235 aa37.29■■■■□ 3.56
LDB1-204ENST00000490751 CTDSPL2Q05D32 466 aa37.29■■■■□ 3.56
LDB1-204ENST00000490751 NMIQ13287 307 aaPredicted RBP37.29■■■■□ 3.56
LDB1-204ENST00000490751 TMEM132BQ14DG7 1078 aa37.29■■■■□ 3.56
LDB1-204ENST00000490751 FAM47AQ5JRC9 791 aa37.29■■■■□ 3.56
LDB1-204ENST00000490751 TFAP4Q01664 338 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 NCAPG2Q86XI2 1143 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 NPLOC4Q8TAT6 608 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 HTATIP2Q9BUP3 242 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 MROH8Q9H579 483 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 FLRT1Q9NZU1 646 aa37.28■■■■□ 3.56
LDB1-204ENST00000490751 STRNO43815 780 aa37.27■■■■□ 3.56
LDB1-204ENST00000490751 TTLL1O95922 423 aa37.27■■■■□ 3.56
LDB1-204ENST00000490751 MKL1Q969V6 931 aa37.27■■■■□ 3.56
LDB1-204ENST00000490751 DDX52Q9Y2R4 599 aaKnown RBP eCLIP37.27■■■■□ 3.56
LDB1-204ENST00000490751 VWA5AO00534 786 aa37.26■■■■□ 3.56
LDB1-204ENST00000490751 ADORA2AP29274 412 aa37.26■■■■□ 3.56
LDB1-204ENST00000490751 IRX6P78412 446 aaPredicted RBP37.26■■■■□ 3.56
LDB1-204ENST00000490751 LRRC47Q8N1G4 583 aaKnown RBP37.26■■■■□ 3.56
LDB1-204ENST00000490751 DPF3Q92784 378 aa37.26■■■■□ 3.56
LDB1-204ENST00000490751 CCND3P30281 292 aaPredicted RBP37.25■■■■□ 3.55
LDB1-204ENST00000490751 ALX1Q15699 326 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 MFSD14CQ5VZR4 134 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 DPP9Q86TI2 863 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 ZNF589Q86UQ0 364 aaPredicted RBP37.25■■■■□ 3.55
LDB1-204ENST00000490751 SLF1Q9BQI6 1058 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 ANAPC4Q9UJX5 808 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 SYNPO2Q9UMS6 1093 aa37.25■■■■□ 3.55
LDB1-204ENST00000490751 ANKLE1Q8NAG6 615 aa37.24■■■■□ 3.55
LDB1-204ENST00000490751 INCENPQ9NQS7 918 aa37.24■■■■□ 3.55
LDB1-204ENST00000490751 SLC25A27O95847 323 aa37.23■■■■□ 3.55
LDB1-204ENST00000490751 REPS2Q8NFH8 660 aa37.23■■■■□ 3.55
LDB1-204ENST00000490751 DIS3LQ8TF46 1054 aaKnown RBP37.23■■■■□ 3.55
LDB1-204ENST00000490751 PAWRQ96IZ0 340 aaKnown RBP37.23■■■■□ 3.55
LDB1-204ENST00000490751 CCDC171Q6TFL3 1326 aa37.22■■■■□ 3.55
LDB1-204ENST00000490751 SDSP20132 328 aa37.22■■■■□ 3.55
LDB1-204ENST00000490751 RIOX2Q8IUF8 465 aa37.22■■■■□ 3.55
LDB1-204ENST00000490751 ZNF214Q9UL59 606 aaPredicted RBP37.22■■■■□ 3.55
LDB1-204ENST00000490751 OGDHLQ9ULD0 1010 aa37.22■■■■□ 3.55
LDB1-204ENST00000490751 TACC3Q9Y6A5 838 aa37.22■■■■□ 3.55
LDB1-204ENST00000490751 ZNFX1Q9P2E3 1918 aaKnown RBP37.21■■■■□ 3.55
LDB1-204ENST00000490751 TSPY2A6NKD2 308 aa37.21■■■■□ 3.55
LDB1-204ENST00000490751 FGAP02671 866 aa37.21■■■■□ 3.55
LDB1-204ENST00000490751 HSPD1P10809 573 aaKnown RBP37.21■■■■□ 3.55
LDB1-204ENST00000490751 ABRAQ8N0Z2 381 aa37.21■■■■□ 3.55
LDB1-204ENST00000490751 GMCL1P1Q8NEA9 526 aa37.21■■■■□ 3.55
LDB1-204ENST00000490751 FRMPD3Q5JV73 1810 aa37.2■■■■□ 3.55
LDB1-204ENST00000490751 STAT3P40763 770 aa37.2■■■■□ 3.55
LDB1-204ENST00000490751 NECAB2Q7Z6G3 386 aa37.2■■■■□ 3.55
LDB1-204ENST00000490751 H0YGN5 161 aa37.19■■■■□ 3.54
LDB1-204ENST00000490751 COBLO75128 1261 aa37.19■■■■□ 3.54
LDB1-204ENST00000490751 FCER1AP12319 257 aa37.19■■■■□ 3.54
LDB1-204ENST00000490751 CYP2C19P33261 490 aa37.19■■■■□ 3.54
LDB1-204ENST00000490751 SLFN13Q68D06 897 aa37.19■■■■□ 3.54
LDB1-204ENST00000490751 PRPF38AQ8NAV1 312 aaKnown RBP37.19■■■■□ 3.54
LDB1-204ENST00000490751 ZMYM6O95789 1325 aa37.18■■■■□ 3.54
LDB1-204ENST00000490751 SLC5A4Q9NY91 659 aa37.18■■■■□ 3.54
LDB1-204ENST00000490751 RANBP6O60518 1105 aaKnown RBP37.17■■■■□ 3.54
LDB1-204ENST00000490751 IGHA2P01877 340 aa37.17■■■■□ 3.54
LDB1-204ENST00000490751 PPP4R3BQ5MIZ7 849 aa37.17■■■■□ 3.54
LDB1-204ENST00000490751 OLFML2BQ68BL8 750 aa37.17■■■■□ 3.54
LDB1-204ENST00000490751 STX8Q9UNK0 236 aa37.17■■■■□ 3.54
LDB1-204ENST00000490751 ALPK3Q96L96 1907 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 ORC4O43929 436 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 COPB2P35606 906 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 MNX1P50219 401 aaPredicted RBP37.16■■■■□ 3.54
LDB1-204ENST00000490751 LHX8Q68G74 356 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 KIFC2Q96AC6 838 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 MMP19Q99542 508 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 IL17RBQ9NRM6 502 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 FEM1BQ9UK73 627 aa37.16■■■■□ 3.54
LDB1-204ENST00000490751 NMT2O60551 498 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 FGRP09769 529 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 BMP3P12645 472 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 MFAP1P55081 439 aaKnown RBP37.15■■■■□ 3.54
LDB1-204ENST00000490751 TEX13BQ9BXU2 312 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 NBPF3Q9H094 633 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 TOMM22Q9NS69 142 aa37.15■■■■□ 3.54
LDB1-204ENST00000490751 DIAPH3Q9NSV4 1193 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms