RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ICA1Q05084 483 aa18.76■□□□□ 0.59
COL2A1-207ENST00000490609 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
COL2A1-207ENST00000490609 MAML3Q96JK9 1138 aa18.76■□□□□ 0.59
COL2A1-207ENST00000490609 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 MSCO60682 206 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 ABRAQ8N0Z2 381 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 CCDC17Q96LX7 622 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 MROH8Q9H579 483 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 CHD9Q3L8U1 2897 aa18.75■□□□□ 0.59
COL2A1-207ENST00000490609 WDR46O15213 610 aaKnown RBP18.74■□□□□ 0.59
COL2A1-207ENST00000490609 SEPT4O43236 478 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 RTP1P59025 263 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 SNX17Q15036 470 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 SLC39A5Q6ZMH5 540 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 STRBPQ96SI9 672 aaKnown RBP18.74■□□□□ 0.59
COL2A1-207ENST00000490609 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 SLC4A4Q9Y6R1 1079 aa18.74■□□□□ 0.59
COL2A1-207ENST00000490609 GSG1L2A8MUP6 293 aa18.73■□□□□ 0.59
COL2A1-207ENST00000490609 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
COL2A1-207ENST00000490609 PLS1Q14651 629 aa18.73■□□□□ 0.59
COL2A1-207ENST00000490609 NCAPG2Q86XI2 1143 aa18.73■□□□□ 0.59
COL2A1-207ENST00000490609 ZNF214Q9UL59 606 aaPredicted RBP18.73■□□□□ 0.59
COL2A1-207ENST00000490609 PGK2P07205 417 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 LRRC41Q15345 812 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 ZNF792Q3KQV3 632 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 FAM47AQ5JRC9 791 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 SH3RF1Q7Z6J0 888 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 OSBP2Q969R2 916 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL2A1-207ENST00000490609 KANSL2Q9H9L4 492 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 RCAN3Q9UKA8 241 aa18.72■□□□□ 0.59
COL2A1-207ENST00000490609 VWA5AO00534 786 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 RASA1P20936 1047 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 RIOX2Q8IUF8 465 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 PPP1R9AQ9ULJ8 1098 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 STXBP5LQ9Y2K9 1186 aa18.71■□□□□ 0.59
COL2A1-207ENST00000490609 TRIM43BA6NCK2 446 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 DLL1O00548 723 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 FCER1AP12319 257 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 ITGB8P26012 769 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 ADCYAP1R1P41586 468 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-207ENST00000490609 ARRDC4Q8NCT1 418 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 TRIM43Q96BQ3 446 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-207ENST00000490609 GUCD1Q96NT3 240 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-207ENST00000490609 EPB41L4AQ9HCS5 686 aaPredicted RBP18.7■□□□□ 0.58
COL2A1-207ENST00000490609 RIPK3Q9Y572 518 aa18.7■□□□□ 0.58
COL2A1-207ENST00000490609 IGKV6D-41A0A0C4DH26 115 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 SLC25A27O95847 323 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 ZNF865P0CJ78 1059 aaPredicted RBP18.69■□□□□ 0.58
COL2A1-207ENST00000490609 TRIM60Q495X7 471 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 C9orf50Q5SZB4 431 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 SH2D4AQ9H788 454 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 ATP11BQ9Y2G3 1177 aa18.69■□□□□ 0.58
COL2A1-207ENST00000490609 STAT3P40763 770 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 SHHQ15465 462 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 C1orf53Q5VUE5 145 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 LENG1Q96BZ8 264 aaPredicted RBP18.68■□□□□ 0.58
COL2A1-207ENST00000490609 MMP19Q99542 508 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 TINF2Q9BSI4 451 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 PDLIM7Q9NR12 457 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 ECHDC1Q9NTX5 307 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 REV3LO60673 3130 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 ROBO3Q96MS0 1386 aa18.68■□□□□ 0.58
COL2A1-207ENST00000490609 FAM109BQ6ICB4 259 aaPredicted RBP18.67■□□□□ 0.58
COL2A1-207ENST00000490609 STK11IPQ8N1F8 1099 aa18.67■□□□□ 0.58
COL2A1-207ENST00000490609 KBTBD3Q8NAB2 608 aa18.67■□□□□ 0.58
COL2A1-207ENST00000490609 BADQ92934 168 aa18.67■□□□□ 0.58
COL2A1-207ENST00000490609 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
COL2A1-207ENST00000490609 DIS3Q9Y2L1 958 aaKnown RBP18.67■□□□□ 0.58
COL2A1-207ENST00000490609 CHD7Q9P2D1 2997 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 DNAJC25-GNG10A0A024R161 153 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 F5H6K3 240 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 M0R2C6 588 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 KLRC3Q07444 240 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 FGD4Q96M96 766 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 SLC5A4Q9NY91 659 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
COL2A1-207ENST00000490609 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
COL2A1-207ENST00000490609 KBTBD13C9JR72 458 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 SNAI1O95863 264 aaPredicted RBP18.65■□□□□ 0.58
COL2A1-207ENST00000490609 NDUFB10O96000 172 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 PGK1P00558 417 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 EPHB4P54760 987 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 IRX5P78411 483 aaPredicted RBP18.65■□□□□ 0.58
COL2A1-207ENST00000490609 TLE2Q04725 743 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 ZSCAN25Q6NSZ9 544 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 GIMAP6Q6P9H5 292 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 MKL1Q969V6 931 aa18.65■□□□□ 0.58
COL2A1-207ENST00000490609 LBHD1Q9BQE6 289 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms