RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
SRGAP3-208ENST00000490348 FLOT1O75955 427 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 SEC24BO95487 1268 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 MCCP23508 829 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 LACTBP83111 547 aaPredicted RBP16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 COG2Q14746 738 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 C8orf34Q49A92 452 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 RNF20Q5VTR2 975 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 RALYLQ86SE5 291 aaKnown RBP16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 MORF4L1Q9UBU8 362 aa16.92■□□□□ 0.3
SRGAP3-208ENST00000490348 DSG3P32926 999 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 Q3C1V9 767 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 GPHNQ9NQX3 736 aaPredicted RBP16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 BTBD7Q9P203 1132 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 SNX14Q9Y5W7 946 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 A0A0G2JMZ2 1700 aa16.91■□□□□ 0.3
SRGAP3-208ENST00000490348 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 IGDCC4Q8TDY8 1250 aa16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 ATG4CQ96DT6 458 aa16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 PPP1R9AQ9ULJ8 1098 aa16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 ADAMTS5Q9UNA0 930 aa16.9■□□□□ 0.3
SRGAP3-208ENST00000490348 SNHG28P0DPA3 235 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 PDHBP11177 359 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 BMP3P12645 472 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 SLC1A4P43007 532 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 PNMA1Q8ND90 353 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 TRIM47Q96LD4 638 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 HOXC10Q9NYD6 342 aa16.89■□□□□ 0.3
SRGAP3-208ENST00000490348 MYPNQ86TC9 1320 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 PRC1O43663 620 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 ERVK-24P63145 666 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
SRGAP3-208ENST00000490348 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 VWA5AO00534 786 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 MCM5P33992 734 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 NEK1Q96PY6 1258 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 PORCNQ9H237 461 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 KAT14Q9H8E8 782 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 FEM1BQ9UK73 627 aa16.88■□□□□ 0.29
SRGAP3-208ENST00000490348 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 CPA1P15085 419 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 PSMC4P43686 418 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 TMEM132BQ14DG7 1078 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
SRGAP3-208ENST00000490348 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 STAT2P52630 851 aa16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 KRT32Q14532 448 aa16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 WTAPQ15007 396 aa16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
SRGAP3-208ENST00000490348 PLA2G6O60733 806 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 GOLGA8HP0CJ92 632 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 SLC16A2P36021 539 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 MB21D1Q8N884 522 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 EFCC1Q9HA90 598 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 GPCPD1Q9NPB8 672 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 COL11A1P12107 1806 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 MGAMO43451 1857 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 TROAPQ12815 778 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 BTNL9Q6UXG8 535 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 TMEM87BQ96K49 555 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
SRGAP3-208ENST00000490348 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms