RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
LSAMP-205ENST00000490035 RSAD2Q8WXG1 361 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 MRFAP1L1Q96HT8 127 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 TCEANC2Q96MN5 208 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 TFCP2L1Q9NZI6 479 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 KLHL14Q9P2G3 628 aa9.75□□□□□ -0.85
LSAMP-205ENST00000490035 PRPF6O94906 941 aaKnown RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 RGS16O15492 202 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 HSPA6P17066 643 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 SEMA3FQ13275 785 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 CABP7Q86V35 215 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 ARHGEF2Q92974 986 aaKnown RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 MYOCDQ8IZQ8 938 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 RGS12O14924 1447 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 KDM5CP41229 1560 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 GPR108Q9NPR9 543 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 V9GY48 417 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 F8W8V4 182 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 ANXA1P04083 346 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 LMNB1P20700 586 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 CMA1P23946 247 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 NAA25Q14CX7 972 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 DCAF15Q66K64 600 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 DPH6Q7L8W6 267 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 XPOTO43592 962 aaKnown RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 DNAJC8O75937 253 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-205ENST00000490035 KRT3P12035 628 aa9.74□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF500O60304 480 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 KRT15P19012 456 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 GARSP41250 739 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 UAP1Q16222 522 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 FAM71BQ8TC56 605 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ZHX1Q9UKY1 873 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 HMGB3O15347 200 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 SATB1Q01826 763 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ASPHQ12797 758 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 COL4A3BPQ9Y5P4 624 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 TET3O43151 1660 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 HPDP32754 393 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 HSP90AA5PQ58FG0 334 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 RINT1Q6NUQ1 792 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ZBTB8OSQ8IWT0 167 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 UFL1O94874 794 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 CA8P35219 290 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 CHST3Q7LGC8 479 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PPANQ9NQ55 473 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 STK17AQ9UEE5 414 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 GCFC2P16383 781 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PHLPP2Q6ZVD8 1323 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 CDKL2Q92772 493 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 RPAP1Q9BWH6 1393 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PTPRTO14522 1441 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ABCC4O15439 1325 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 TXKP42681 527 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 ZNF131P52739 623 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 KRT12Q99456 494 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 MLH3Q9UHC1 1453 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 E7EWF7 191 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 GAS7O60861 476 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PPP6R2O75170 966 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 BRD1O95696 1058 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 GPATCH4Q5T3I0 446 aaKnown RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 FOXP1Q9H334 677 aaPredicted RBP9.73□□□□□ -0.85
LSAMP-205ENST00000490035 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 PCDHA12Q9UN75 941 aa9.73□□□□□ -0.85
LSAMP-205ENST00000490035 A0A1W2PQ27 194 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 A0A1W2PQ64 194 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 MGEA5O60502 916 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 RASA3Q14644 834 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 SMIM23A6NLE4 172 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 CIAO1O76071 339 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 EEF1GP26641 437 aaKnown RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 SLC4A8Q2Y0W8 1093 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 EPS15L1Q9UBC2 864 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 SPHKAPQ2M3C7 1700 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PTPRKQ15262 1439 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 CEP104O60308 925 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 TBC1D8O95759 1140 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 DMP1Q13316 513 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 PPP2R5AQ15172 486 aa9.72□□□□□ -0.85
LSAMP-205ENST00000490035 DPP8Q6V1X1 898 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-205ENST00000490035 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms