RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ADGRF5Q8IZF2 1346 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SPATA31D1Q6ZQQ2 1576 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 INO80Q9ULG1 1556 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ENO4A6NNW6 628 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PPP1R12BO60237 982 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RPSAP08865 295 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 FAM163BP0C2L3 166 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 FERP16591 822 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 GCLCP48506 637 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CEBPZQ03701 1054 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA8FQ08AF8 430 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 GOLGA8DPQ0D2H9 430 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF211Q13398 564 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 XRCC4Q13426 336 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC96Q2M329 555 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CREB3L3Q68CJ9 461 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SPECC1LQ69YQ0 1117 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 DESI1Q6ICB0 168 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SLC30A9Q6PML9 568 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CRELD2Q6UXH1 353 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 BZW1Q7L1Q6 419 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RASGRP2Q7LDG7 609 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 UBE3BQ7Z3V4 1068 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SDCCAG8Q86SQ7 713 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RNF135Q8IUD6 432 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ANKMY2Q8IV38 441 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 APLFQ8IW19 511 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC170Q8IYT3 715 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 OGFOD1Q8N543 542 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 NOA1Q8NC60 698 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 CCHCR1Q8TD31 782 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RIN2Q8WYP3 895 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 P3H4Q92791 437 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 MKL1Q969V6 931 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SCLT1Q96NL6 688 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 LLPHQ9BRT6 129 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 SLC39A2Q9NP94 309 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 LZTFL1Q9NQ48 299 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 RTEL1Q9NZ71 1219 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 PCDHA7Q9UN72 937 aa5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 TTF2Q9UNY4 1162 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-206ENST00000489853 ABCC3O15438 1527 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ZFYVE16Q7Z3T8 1539 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 MAP3K5Q99683 1374 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CDC42BPGQ6DT37 1551 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CHD2O14647 1828 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 NPHP4O75161 1426 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 TMEM232C9JQI7 657 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 AKR1B15C9JRZ8 316 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 SMNDC1O75940 238 aaKnown RBP eCLIP5.34□□□□□ -1.557e-8■□□□□ 8.7
SNRNP40-206ENST00000489853 RPS6KB1P23443 525 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CTHP32929 405 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 PAPOLAP51003 745 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ADKP55263 362 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 MARSP56192 900 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 PPP4CP60510 307 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CCT2P78371 535 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 AMPD2Q01433 879 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ROR2Q01974 943 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 IFT88Q13099 833 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 TOB2Q14106 344 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 E2F5Q15329 346 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 LACTB2Q53H82 288 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 TJAP1Q5JTD0 557 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CCDC181Q5TID7 509 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 HHATQ5VTY9 493 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 NAA35Q5VZE5 725 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 OLFM4Q6UX06 510 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 NFXL1Q6ZNB6 911 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 NCAPG2Q86XI2 1143 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 SLC35F6Q8N357 371 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 AFAP1Q8N556 730 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 RASSF8Q8NHQ8 419 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ZNF473Q8WTR7 871 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ZFAND2BQ8WV99 257 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 RUBCNQ92622 972 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 EZH1Q92800 747 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 MAP4K1Q92918 833 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CLP1Q92989 425 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 ALS2CR12Q96Q35 445 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 USP28Q96RU2 1077 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CCT8L2Q96SF2 557 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 USB1Q9BQ65 265 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 DESI2Q9BSY9 194 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 SELENOOQ9BVL4 669 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 HOOK1Q9UJC3 728 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 TUBE1Q9UJT0 475 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 PCDHB9Q9Y5E1 797 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 FER1L4A9Z1Z3 1794 aa5.34□□□□□ -1.55
SNRNP40-206ENST00000489853 CDC42BPBQ9Y5S2 1711 aa5.34□□□□□ -1.56
SNRNP40-206ENST00000489853 USP42Q9H9J4 1324 aaKnown RBP5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 PREX1Q8TCU6 1659 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 POGZQ7Z3K3 1410 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 A0A1B0GVL5 298 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 A6NHS1 94 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 SLC27A2O14975 620 aa5.33□□□□□ -1.56
SNRNP40-206ENST00000489853 FYB1O15117 783 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms