RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT9-207ENST00000489687 COL11A1P12107 1806 aaPredicted RBP6.96□□□□□ -1.3
CNOT9-207ENST00000489687 A0A1W2PRG0 241 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 CNMDO75829 334 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 HMGCRP04035 888 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 AKR1B1P15121 316 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 ADD2P35612 726 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 GJA8P48165 433 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 GCLCP48506 637 aaPredicted RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 ERVK-9P63128 1117 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 ERVK-24P63145 666 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 HABP4Q5JVS0 413 aaKnown RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 TATDN1Q6P1N9 297 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 UBE2Q1Q7Z7E8 422 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 FOXP4Q8IVH2 680 aaPredicted RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 SPICE1Q8N0Z3 855 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 DPF3Q92784 378 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 GTPBP4Q9BZE4 634 aaKnown RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 EHD4Q9H223 541 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 RPAP3Q9H6T3 665 aaPredicted RBP6.95□□□□□ -1.3
CNOT9-207ENST00000489687 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 MORF4L1Q9UBU8 362 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 UNC80Q8N2C7 3258 aa6.95□□□□□ -1.3
CNOT9-207ENST00000489687 GREB1LQ9C091 1923 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 PRUNE2Q8WUY3 3088 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 A0A0U1RQG5 324 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 TFRCP02786 760 aaKnown RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 ATP5JP18859 108 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 ATP2B2Q01814 1243 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 GABPAQ06546 454 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 IRF5Q13568 498 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 TTF1Q15361 905 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 Q3C1V9 767 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 GPR142Q7Z601 462 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 ZNF710Q8N1W2 664 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 GPRC5AQ8NFJ5 357 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 ANP32BQ92688 251 aaKnown RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 ARID3AQ99856 593 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 HAUS7Q99871 368 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 PUS7LQ9H0K6 701 aaKnown RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 CWC22Q9HCG8 908 aaKnown RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 PAK6Q9NQU5 681 aaPredicted RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 BTBD7Q9P203 1132 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 RBM27Q9P2N5 1060 aaKnown RBP6.94□□□□□ -1.3
CNOT9-207ENST00000489687 GJD2Q9UKL4 321 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 VCANP13611 3396 aa6.94□□□□□ -1.3
CNOT9-207ENST00000489687 C19orf81C9J6K1 198 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L12C9JPN9 530 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L21D6R901 530 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 M0R2C6 588 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 RAD21O60216 631 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 SGPL1O95470 568 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 ZKSCAN1P17029 563 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 CCND3P30281 292 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 HOXA7P31268 230 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 FXR1P51114 621 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 ICA1Q05084 483 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PDE3AQ14432 1141 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 CCAR1Q8IX12 1150 aaKnown RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 HOMEZQ8IX15 550 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 C7orf61Q8IZ16 206 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PXYLP1Q8TE99 480 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PAWRQ96IZ0 340 aaKnown RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 C12orf42Q96LP6 360 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 KIAA1683Q9H0B3 1180 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 FBXO28Q9NVF7 368 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 FLRT1Q9NZU1 646 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 ZMYND8Q9ULU4 1186 aaPredicted RBP6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PCDHB15Q9Y5E8 787 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 PCDHGA4Q9Y5G9 962 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 SLC4A4Q9Y6R1 1079 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 MYH4Q9Y623 1939 aa6.93□□□□□ -1.3
CNOT9-207ENST00000489687 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L15C9J2P7 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L13C9JLJ4 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L11C9JVI0 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L18D6R9N7 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L22D6RA61 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L17D6RBQ6 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L19D6RCP7 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 USP17L20D6RJB6 530 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 MAP3K7O43318 606 aa6.92□□□□□ -1.3
CNOT9-207ENST00000489687 OATP04181 439 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms