RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
TFF3-203ENST00000489676 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
TFF3-203ENST00000489676 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
TFF3-203ENST00000489676 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
TFF3-203ENST00000489676 ZBTB43O43298 467 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 PFKFB2O60825 505 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 GTF2A2P52657 109 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
TFF3-203ENST00000489676 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
TFF3-203ENST00000489676 CCDC102AQ96A19 550 aa12.73□□□□□ -0.37
TFF3-203ENST00000489676 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 PLA2G6O60733 806 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CALM1P0DP23 149 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CALM2P0DP24 149 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CALM3P0DP25 149 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CETPP11597 493 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CDC27P30260 824 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 METAP2P50579 478 aaKnown RBP eCLIP12.72□□□□□ -0.37
TFF3-203ENST00000489676 FUT2Q10981 343 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 TREML2Q5T2D2 321 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 BTNL9Q6UXG8 535 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
TFF3-203ENST00000489676 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
TFF3-203ENST00000489676 FRMPD2Q68DX3 1309 aaPredicted RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 CNTNAP5Q8WYK1 1306 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 SLC34A2O95436 690 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 BMP3P12645 472 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 SLC1A4P43007 532 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 SCRN1Q12765 414 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 NTRK3Q16288 839 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 CCL15Q16663 113 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 RTN1Q16799 776 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 GPATCH4Q5T3I0 446 aaKnown RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 KCTD1Q719H9 257 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 NBPF11Q86T75 865 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 CCDC144CPQ8IYA2 1237 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 PTPN18Q99952 460 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.37
TFF3-203ENST00000489676 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 MTMR7Q9Y216 660 aa12.71□□□□□ -0.37
TFF3-203ENST00000489676 MANSC4A6NHS7 340 aaPredicted RBP12.7□□□□□ -0.38
TFF3-203ENST00000489676 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
TFF3-203ENST00000489676 CYTH3O43739 400 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 RAD21O60216 631 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 KIF5BP33176 963 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 STK3Q13188 491 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 NOGQ13253 232 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 CUL4AQ13619 759 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 TTBK2Q6IQ55 1244 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 GADL1Q6ZQY3 521 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
TFF3-203ENST00000489676 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
TFF3-203ENST00000489676 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
TFF3-203ENST00000489676 SLC45A1Q9Y2W3 748 aa12.7□□□□□ -0.38
TFF3-203ENST00000489676 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
TFF3-203ENST00000489676 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
TFF3-203ENST00000489676 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
TFF3-203ENST00000489676 STAT2P52630 851 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms