RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 MAML3Q96JK9 1138 aa23.31■■□□□ 1.32
APTX-229ENST00000489583 NRBP1Q9UHY1 535 aa23.31■■□□□ 1.32
APTX-229ENST00000489583 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
APTX-229ENST00000489583 CYP2D7A0A087X1C5 515 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 STAT3P40763 770 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 LRRFIP1Q32MZ4 808 aaKnown RBP23.3■■□□□ 1.32
APTX-229ENST00000489583 SLC39A5Q6ZMH5 540 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 RNF180Q86T96 592 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 CNPY2Q9Y2B0 182 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 LAMA3Q16787 3333 aa23.3■■□□□ 1.32
APTX-229ENST00000489583 MYH8P13535 1937 aa23.29■■□□□ 1.32
APTX-229ENST00000489583 TMEM132BQ14DG7 1078 aa23.29■■□□□ 1.32
APTX-229ENST00000489583 KIAA1755Q5JYT7 1200 aa23.29■■□□□ 1.32
APTX-229ENST00000489583 MTMR10Q9NXD2 777 aa23.29■■□□□ 1.32
APTX-229ENST00000489583 ZNF236Q9UL36 1845 aa23.29■■□□□ 1.32
APTX-229ENST00000489583 ADCYAP1R1P41586 468 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 SLFNL1Q499Z3 407 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 PRAMEF19Q5SWL8 479 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 CTR9Q6PD62 1173 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 RIOX2Q8IUF8 465 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 XPNPEP3Q9NQH7 507 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 ECHDC1Q9NTX5 307 aa23.28■■□□□ 1.32
APTX-229ENST00000489583 VWA5AO00534 786 aa23.27■■□□□ 1.32
APTX-229ENST00000489583 FAM83BQ5T0W9 1011 aa23.27■■□□□ 1.32
APTX-229ENST00000489583 SIAH1Q8IUQ4 282 aa23.27■■□□□ 1.32
APTX-229ENST00000489583 FERMT2Q96AC1 680 aa23.27■■□□□ 1.32
APTX-229ENST00000489583 PPP1R9AQ9ULJ8 1098 aa23.27■■□□□ 1.32
APTX-229ENST00000489583 DIS3Q9Y2L1 958 aaKnown RBP23.27■■□□□ 1.32
APTX-229ENST00000489583 FRMPD3Q5JV73 1810 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 MINDY4BA8MYZ0 360 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 APPP05067 770 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 LRRC41Q15345 812 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 ZNF697Q5TEC3 545 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 GIMAP6Q6P9H5 292 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 DDX11Q96FC9 970 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 TINF2Q9BSI4 451 aa23.26■■□□□ 1.31
APTX-229ENST00000489583 PUS7LQ9H0K6 701 aaKnown RBP23.26■■□□□ 1.31
APTX-229ENST00000489583 PGK2P07205 417 aa23.25■■□□□ 1.31
APTX-229ENST00000489583 GNAT2P19087 354 aa23.25■■□□□ 1.31
APTX-229ENST00000489583 TRIM60Q495X7 471 aa23.25■■□□□ 1.31
APTX-229ENST00000489583 FAM109BQ6ICB4 259 aaPredicted RBP23.25■■□□□ 1.31
APTX-229ENST00000489583 ZNF444Q8N0Y2 327 aaPredicted RBP23.25■■□□□ 1.31
APTX-229ENST00000489583 SLF1Q9BQI6 1058 aa23.25■■□□□ 1.31
APTX-229ENST00000489583 FBXO28Q9NVF7 368 aa23.25■■□□□ 1.31
APTX-229ENST00000489583 ZBED4O75132 1171 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 IGHA2P01877 340 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
APTX-229ENST00000489583 AKR1A1P14550 325 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 SLC4A3P48751 1232 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 TDO2P48775 406 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 FAM47AQ5JRC9 791 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 STK11IPQ8N1F8 1099 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 TEX13BQ9BXU2 312 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 ADAMTS5Q9UNA0 930 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
APTX-229ENST00000489583 A0A0G2JMZ2 1700 aa23.23■■□□□ 1.31
APTX-229ENST00000489583 SMARCA5O60264 1052 aaPredicted RBP23.23■■□□□ 1.31
APTX-229ENST00000489583 SBK1Q52WX2 424 aa23.23■■□□□ 1.31
APTX-229ENST00000489583 PRPF38AQ8NAV1 312 aaKnown RBP23.23■■□□□ 1.31
APTX-229ENST00000489583 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
APTX-229ENST00000489583 NACAP1Q9BZK3 213 aa23.23■■□□□ 1.31
APTX-229ENST00000489583 NYAP2Q9P242 653 aa23.23■■□□□ 1.31
APTX-229ENST00000489583 ISY1Q9ULR0 285 aaKnown RBP23.23■■□□□ 1.31
APTX-229ENST00000489583 TACC3Q9Y6A5 838 aa23.23■■□□□ 1.31
APTX-229ENST00000489583 BAZ2AQ9UIF9 1905 aaKnown RBP23.23■■□□□ 1.31
APTX-229ENST00000489583 SLC3A2P08195 630 aaKnown RBP23.22■■□□□ 1.31
APTX-229ENST00000489583 C1orf53Q5VUE5 145 aa23.22■■□□□ 1.31
APTX-229ENST00000489583 SNRNP48Q6IEG0 339 aaKnown RBP23.22■■□□□ 1.31
APTX-229ENST00000489583 MSL3Q8N5Y2 521 aaKnown RBP23.22■■□□□ 1.31
APTX-229ENST00000489583 KBTBD3Q8NAB2 608 aa23.22■■□□□ 1.31
APTX-229ENST00000489583 NUP133Q8WUM0 1156 aa23.22■■□□□ 1.31
APTX-229ENST00000489583 APPBP2Q92624 585 aa23.22■■□□□ 1.31
APTX-229ENST00000489583 BADQ92934 168 aa23.21■■□□□ 1.31
APTX-229ENST00000489583 FAM161BQ96MY7 647 aa23.21■■□□□ 1.31
APTX-229ENST00000489583 SPC25Q9HBM1 224 aa23.21■■□□□ 1.31
APTX-229ENST00000489583 CLIP2Q9UDT6 1046 aa23.21■■□□□ 1.31
APTX-229ENST00000489583 COL6A3P12111 3177 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 F5H6K3 240 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 POTEB2H3BUK9 544 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 RNF113AO15541 343 aaKnown RBP23.2■■□□□ 1.3
APTX-229ENST00000489583 PGK1P00558 417 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 KLRC3Q07444 240 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 SNX17Q15036 470 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 ZNF792Q3KQV3 632 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 ZBTB47Q9UFB7 747 aaPredicted RBP23.2■■□□□ 1.3
APTX-229ENST00000489583 ZNF214Q9UL59 606 aaPredicted RBP23.2■■□□□ 1.3
APTX-229ENST00000489583 FAM184BQ9ULE4 1060 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 PHF24Q9UPV7 400 aa23.2■■□□□ 1.3
APTX-229ENST00000489583 SMIM22K7EJ46 135 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 CHGBP05060 677 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 CLTBP09497 229 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 RAG1P15918 1043 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 RASA1P20936 1047 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 TLE2Q04725 743 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 PDE4BQ07343 736 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 CPXCR1Q8N123 301 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 KIFC2Q96AC6 838 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 PDLIM7Q9NR12 457 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 FBXO40Q9UH90 709 aa23.19■■□□□ 1.3
APTX-229ENST00000489583 GSG1L2A8MUP6 293 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms