RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 CTR9Q6PD62 1173 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 REPS2Q8NFH8 660 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 ATP8A2Q9NTI2 1148 aa12.15□□□□□ -0.46
CSF3R-213ENST00000489551 RAB11FIP3O75154 756 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 PGK2P07205 417 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
CSF3R-213ENST00000489551 ITGB8P26012 769 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 SNX17Q15036 470 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 LRRC41Q15345 812 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 C9orf50Q5SZB4 431 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CSF3R-213ENST00000489551 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 MROH8Q9H579 483 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 ATP11BQ9Y2G3 1177 aa12.14□□□□□ -0.47
CSF3R-213ENST00000489551 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
CSF3R-213ENST00000489551 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 SHHQ15465 462 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 TRIM60Q495X7 471 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 TRIM43Q96BQ3 446 aaPredicted RBP12.13□□□□□ -0.47
CSF3R-213ENST00000489551 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 PDLIM7Q9NR12 457 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
CSF3R-213ENST00000489551 SLC4A4Q9Y6R1 1079 aa12.13□□□□□ -0.47
CSF3R-213ENST00000489551 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 VWA5AO00534 786 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 HMMRO75330 724 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 FCER1AP12319 257 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
CSF3R-213ENST00000489551 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
CSF3R-213ENST00000489551 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
CSF3R-213ENST00000489551 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 SLC25A27O95847 323 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 ZNF865P0CJ78 1059 aaPredicted RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 MS4A1P11836 297 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 RASA1P20936 1047 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 BADQ92934 168 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 MMP19Q99542 508 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 LBHD1Q9BQE6 289 aaPredicted RBP12.11□□□□□ -0.47
CSF3R-213ENST00000489551 KANSL2Q9H9L4 492 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 LCTP09848 1927 aa12.11□□□□□ -0.47
CSF3R-213ENST00000489551 PGK1P00558 417 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 STAT3P40763 770 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 EPHB4P54760 987 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
CSF3R-213ENST00000489551 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 STK11IPQ8N1F8 1099 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSF3R-213ENST00000489551 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
CSF3R-213ENST00000489551 PRDM5Q9NQX1 630 aaPredicted RBP12.1□□□□□ -0.47
CSF3R-213ENST00000489551 PHF24Q9UPV7 400 aa12.1□□□□□ -0.47
CSF3R-213ENST00000489551 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 MUC3AQ02505 3323 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 ADCY6O43306 1168 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 ADAMTS4O75173 837 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 SNAI1O95863 264 aaPredicted RBP12.09□□□□□ -0.47
CSF3R-213ENST00000489551 TLE2Q04725 743 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 FGD4Q96M96 766 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 LRRCC1Q9C099 1032 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 TTYH1Q9H313 450 aaPredicted RBP12.09□□□□□ -0.47
CSF3R-213ENST00000489551 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 SLC5A4Q9NY91 659 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
CSF3R-213ENST00000489551 MYO9BQ13459 2157 aa12.09□□□□□ -0.47
CSF3R-213ENST00000489551 GBF1Q92538 1859 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
CSF3R-213ENST00000489551 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
CSF3R-213ENST00000489551 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
CSF3R-213ENST00000489551 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
CSF3R-213ENST00000489551 NYAP2Q9P242 653 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms