RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 CA12O43570 354 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 FLOT1O75955 427 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 GOLGA8HP0CJ92 632 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 PDHBP11177 359 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 BMP3P12645 472 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 RXRAP19793 462 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 RPS6KB1P23443 525 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 HOXA7P31268 230 aaPredicted RBP9.72□□□□□ -0.85
SF1-218ENST00000489544 SLC16A2P36021 539 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 SNAP25P60880 206 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
SF1-218ENST00000489544 USP17L24Q0WX57 530 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 WTAPQ15007 396 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 CCDC96Q2M329 555 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 OTUD7BQ6GQQ9 843 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
SF1-218ENST00000489544 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 LPAR1Q92633 364 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 ATG4CQ96DT6 458 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 TTC14Q96N46 770 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 PARK7Q99497 189 aaKnown RBP9.72□□□□□ -0.85
SF1-218ENST00000489544 KAT14Q9H8E8 782 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 ADGRA2Q96PE1 1338 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
SF1-218ENST00000489544 ERICH2A1L162 156 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
SF1-218ENST00000489544 TMEM232C9JQI7 657 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 ALDH1A1P00352 501 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 OSBPP22059 807 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 PSMA5P28066 241 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 SLC1A4P43007 532 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 HERVK_113P62684 666 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 CAP1Q01518 475 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 SART3Q15020 963 aaKnown RBP9.71□□□□□ -0.86
SF1-218ENST00000489544 NFXL1Q6ZNB6 911 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 Q6ZUG5 572 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 CCDC144CPQ8IYA2 1237 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 ANKRD13CQ8N6S4 541 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 SMCR8Q8TEV9 937 aaPredicted RBP9.71□□□□□ -0.86
SF1-218ENST00000489544 NUP133Q8WUM0 1156 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 TMEM87BQ96K49 555 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 KIF2CQ99661 725 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 C22orf23Q9BZE7 217 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 ZFYVE28Q9HCC9 887 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 TXNRD2Q9NNW7 524 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 BRPF3Q9ULD4 1205 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 SLC45A1Q9Y2W3 748 aa9.71□□□□□ -0.86
SF1-218ENST00000489544 TLR2O60603 784 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 CNMDO75829 334 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 SNHG28P0DPA3 235 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 HSPA8P11142 646 aaKnown RBP9.7□□□□□ -0.86
SF1-218ENST00000489544 TAL1P17542 331 aaPredicted RBP9.7□□□□□ -0.86
SF1-218ENST00000489544 DSG3P32926 999 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 NT5C2P49902 561 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 LBX1P52954 281 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 ZNF543Q08ER8 600 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
SF1-218ENST00000489544 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
SF1-218ENST00000489544 COG2Q14746 738 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 Q3C1V9 767 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 C17orf99Q6UX52 265 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 DCAF4Q8WV16 495 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 KIFC2Q96AC6 838 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 UBA5Q9GZZ9 404 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 ZCCHC17Q9NP64 241 aaKnown RBP9.7□□□□□ -0.86
SF1-218ENST00000489544 SAGE1Q9NXZ1 904 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 BTBD7Q9P203 1132 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 RBPJLQ9UBG7 517 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 PNMA3Q9UL41 463 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 SYNPO2Q9UMS6 1093 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 CYP46A1Q9Y6A2 500 aa9.7□□□□□ -0.86
SF1-218ENST00000489544 KLF18A0A0U1RQI7 1052 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 CCDC69A6NI79 296 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 GPR25O00155 361 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 EIF5BO60841 1220 aaKnown RBP9.69□□□□□ -0.86
SF1-218ENST00000489544 HMGB1P09429 215 aaKnown RBP9.69□□□□□ -0.86
SF1-218ENST00000489544 BCRP11274 1271 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 CTGFP29279 349 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 LIFRP42702 1097 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 ANAPC15P60006 121 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 FGD1P98174 961 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 TROAPQ12815 778 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 TOB2Q14106 344 aaPredicted RBP9.69□□□□□ -0.86
SF1-218ENST00000489544 SLC35G1Q2M3R5 365 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
SF1-218ENST00000489544 CATIPQ7Z7H3 387 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 NBPF11Q86T75 865 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 MICU3Q86XE3 530 aa9.69□□□□□ -0.86
SF1-218ENST00000489544 ZNF296Q8WUU4 475 aaPredicted RBP9.69□□□□□ -0.86
SF1-218ENST00000489544 BRF1Q92994 677 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms