RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 CTAGE8P0CG41 777 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 MNAT1P51948 309 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 R3HDM1Q15032 1099 aaKnown RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 CTAGE6Q86UF2 777 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 CTAGE4Q8IX94 777 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 ZNF274Q96GC6 653 aaPredicted RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 STK32BQ9NY57 414 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 HOOK1Q9UJC3 728 aaKnown RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 A0A087WUV0 522 aaPredicted RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 RNF40O75150 1001 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 TBX2Q13207 712 aaPredicted RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 GRAPQ13588 217 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 AFAP1L1Q8TED9 768 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 NFE2L3Q9Y4A8 694 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 RAD17O75943 681 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 FGFR2P21802 821 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
SMTN-218ENST00000489337 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 PCDHA5Q9Y5H7 936 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 NUP98P52948 1817 aa13.26□□□□□ -0.29
SMTN-218ENST00000489337 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 ERICH2A1L162 156 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 LIG3P49916 1009 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 EXOSC10Q01780 885 aaKnown RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 SUGP1Q8IWZ8 645 aaKnown RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 LRRIQ3A6PVS8 624 aaPredicted RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 FOXP2O15409 715 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 MSL3Q8N5Y2 521 aaKnown RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 MYO1BO43795 1136 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 CDKL5O76039 1030 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 ERLIN2O94905 339 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
SMTN-218ENST00000489337 MMP14P50281 582 aa13.25□□□□□ -0.29
SMTN-218ENST00000489337 A0A0U1RQJ8 604 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 GSG1L2A8MUP6 293 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 PPEF1O14829 653 aaPredicted RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 TUBB4BP68371 445 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 PDE4BQ07343 736 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMTN-218ENST00000489337 RC3H1Q5TC82 1133 aaKnown RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 TM4SF1P30408 202 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 SH3RF3Q8TEJ3 882 aaPredicted RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 FAM107BQ9H098 131 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 KCNJ14Q9UNX9 436 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 KIF28PB7ZC32 967 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 PSEN1P49768 467 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 SLC39A14Q15043 492 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 CXorf56Q9H5V9 222 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 TTF2Q9UNY4 1162 aaKnown RBP13.24□□□□□ -0.29
SMTN-218ENST00000489337 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
SMTN-218ENST00000489337 ABCC6O95255 1503 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 COL4A1P02462 1669 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 CDC27P30260 824 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMTN-218ENST00000489337 AOC3Q16853 763 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 SPECC1Q5M775 1068 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 NLGN1Q8N2Q7 840 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 SLC35F6Q8N357 371 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMTN-218ENST00000489337 AGXT2Q9BYV1 514 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
SMTN-218ENST00000489337 H0YIN7 160 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 MAP2K2P36507 400 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
SMTN-218ENST00000489337 FOXP4Q8IVH2 680 aaPredicted RBP13.23□□□□□ -0.29
SMTN-218ENST00000489337 CPP00450 1065 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 SHC4Q6S5L8 630 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 RAD9BQ6WBX8 426 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
SMTN-218ENST00000489337 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 USP17L3A6NCW0 530 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 USP17L4A6NCW7 530 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 TUBBP07437 444 aa13.22□□□□□ -0.29
SMTN-218ENST00000489337 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms