RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 GMCL1Q96IK5 515 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 PICK1Q9NRD5 415 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 MTMR6Q9Y217 621 aa13.35□□□□□ -0.27
CMSS1-205ENST00000489081 FRMPD2Q68DX3 1309 aaPredicted RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 WDR33Q9C0J8 1336 aaKnown RBP13.35□□□□□ -0.27
CMSS1-205ENST00000489081 UBE2Q2LH0YL09 131 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 CYTH3O43739 400 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 DEXIO95424 95 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 PTPRAP18433 802 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 SMARCA1P28370 1054 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 PKN1Q16512 942 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
CMSS1-205ENST00000489081 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
CMSS1-205ENST00000489081 WASF1Q92558 559 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 AIFM3Q96NN9 605 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 GOPCQ9HD26 462 aa13.34□□□□□ -0.27
CMSS1-205ENST00000489081 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
CMSS1-205ENST00000489081 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
CMSS1-205ENST00000489081 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 SLC1A4P43007 532 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 KIAA1755Q5JYT7 1200 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 RGS22Q8NE09 1264 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 WDR18Q9BV38 432 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 KIAA1683Q9H0B3 1180 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
CMSS1-205ENST00000489081 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
CMSS1-205ENST00000489081 hCG_1642624A0A1W2PR95 340 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 H3BQV1 296 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 TRAF5O00463 557 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 RAD21O60216 631 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 FOSBP53539 338 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 VGLL4Q14135 290 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
CMSS1-205ENST00000489081 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 ARMC9Q7Z3E5 817 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
CMSS1-205ENST00000489081 TNPO1Q92973 898 aaKnown RBP13.32□□□□□ -0.28
CMSS1-205ENST00000489081 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
CMSS1-205ENST00000489081 FEZ1Q99689 392 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
CMSS1-205ENST00000489081 BMP3P12645 472 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 SCG2P13521 617 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
CMSS1-205ENST00000489081 ZYXQ15942 572 aaKnown RBP13.31□□□□□ -0.28
CMSS1-205ENST00000489081 PFKFB3Q16875 520 aaPredicted RBP13.31□□□□□ -0.28
CMSS1-205ENST00000489081 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 MOB2Q70IA6 237 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 CSADQ9Y600 493 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 ZHX2Q9Y6X8 837 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
CMSS1-205ENST00000489081 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 F13A1P00488 732 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 SLC16A2P36021 539 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 SPP2Q13103 211 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
CMSS1-205ENST00000489081 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 KRT40Q6A162 431 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 BTNL9Q6UXG8 535 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 ADGRF4Q8IZF3 695 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 LPAR1Q92633 364 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
CMSS1-205ENST00000489081 ISY1Q9ULR0 285 aaKnown RBP13.3□□□□□ -0.28
CMSS1-205ENST00000489081 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
CMSS1-205ENST00000489081 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 PLA2G6O60733 806 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 USP14P54578 494 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 BACE1P56817 501 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 RESTQ13127 1097 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 MTMR2Q13614 643 aa13.29□□□□□ -0.28
CMSS1-205ENST00000489081 TRIM29Q14134 588 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms