RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 NMIQ13287 307 aaPredicted RBP4.27□□□□□ -1.73
CALD1-221ENST00000489019 ZYXQ15942 572 aaKnown RBP4.27□□□□□ -1.73
CALD1-221ENST00000489019 NBPF9Q3BBW0 867 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 CCDC81Q6ZN84 652 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 RUFY4Q6ZNE9 571 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 TTC6Q86TZ1 520 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 ZSWIM9Q86XI8 627 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 FERD3LQ96RJ6 166 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.27□□□□□ -1.73
CALD1-221ENST00000489019 EBF1Q9UH73 591 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 TMEM59LQ9UK28 342 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 MINPP1Q9UNW1 487 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.27□□□□□ -1.73
CALD1-221ENST00000489019 TNIKQ9UKE5 1360 aa4.27□□□□□ -1.73
CALD1-221ENST00000489019 C9IYK1 514 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 ZGLP1P0C6A0 271 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 LTKP29376 864 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 GJA8P48165 433 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 SOX9P48436 509 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 HK2P52789 917 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 CHMP4BP1P59074 171 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 RNF4P78317 190 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 TEKQ02763 1124 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 FBXW10Q5XX13 1052 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 INTS3Q68E01 1043 aaKnown RBP4.26□□□□□ -1.73
CALD1-221ENST00000489019 LSRQ86X29 649 aaPredicted RBP4.26□□□□□ -1.73
CALD1-221ENST00000489019 USHBP1Q8N6Y0 703 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 RBBP8NLQ8NC74 664 aaPredicted RBP4.26□□□□□ -1.73
CALD1-221ENST00000489019 RASGRP4Q8TDF6 673 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 PRDM14Q9GZV8 571 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 ACBD3Q9H3P7 528 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 SP110Q9HB58 689 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 EFR3BQ9Y2G0 817 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 ZNF281Q9Y2X9 895 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 CEP162Q5TB80 1403 aa4.26□□□□□ -1.73
CALD1-221ENST00000489019 TTBK1Q5TCY1 1321 aaPredicted RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 CEP164Q9UPV0 1460 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 TOP2BQ02880 1626 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 SHOXO15266 292 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 PRAMEF1O95521 474 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 IMPDH2P12268 514 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 ZEB1P37275 1124 aaPredicted RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 AFMP43652 599 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 KCNMB1Q16558 191 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 CLEC16AQ2KHT3 1053 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 PPFIBP1Q86W92 1011 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 TAB3Q8N5C8 712 aaPredicted RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 DAGLBQ8NCG7 672 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 ENOX1Q8TC92 643 aaKnown RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 SYTL5Q8TDW5 730 aaPredicted RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 GPRASP2Q96D09 838 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 TCTN2Q96GX1 697 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 LIN37Q96GY3 246 aaPredicted RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 KIRREL1Q96J84 757 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 TM9SF2Q99805 663 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 TGIF2Q9GZN2 237 aa4.25□□□□□ -1.73
CALD1-221ENST00000489019 MKRN2Q9H000 416 aaKnown RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 SUCOQ9UBS9 1254 aaKnown RBP4.25□□□□□ -1.73
CALD1-221ENST00000489019 CC2D2AQ9P2K1 1620 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 TMEM82A0PJX8 343 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 SIGLEC6O43699 453 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 HPXP02790 462 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 GLI1P08151 1106 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 GUCY2CP25092 1073 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 TRHRP34981 398 aaPredicted RBP4.24□□□□□ -1.73
CALD1-221ENST00000489019 TXKP42681 527 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 CTSKP43235 329 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 AUHQ13825 339 aaKnown RBP4.24□□□□□ -1.73
CALD1-221ENST00000489019 COL9A2Q14055 689 aaPredicted RBP4.24□□□□□ -1.73
CALD1-221ENST00000489019 TIGD5Q53EQ6 642 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 TDRD10Q5VZ19 366 aaKnown RBP4.24□□□□□ -1.73
CALD1-221ENST00000489019 UNC5AQ6ZN44 842 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 POU5F2Q8N7G0 328 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 G6PC3Q9BUM1 346 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 FOXP3Q9BZS1 431 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 ASCC2Q9H1I8 757 aaPredicted RBP4.24□□□□□ -1.73
CALD1-221ENST00000489019 C19orf44Q9H6X5 657 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 KIF21BO75037 1637 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 BIVM-ERCC5R4GMW8 1640 aa4.24□□□□□ -1.73
CALD1-221ENST00000489019 LTBP3Q9NS15 1303 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 MEIS1O00470 390 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 EFEMP2O95967 443 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 GIPRP48546 466 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 PMS1P54277 932 aaKnown RBP4.23□□□□□ -1.73
CALD1-221ENST00000489019 BBS9Q3SYG4 887 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 AXDND1Q5T1B0 1012 aaPredicted RBP4.23□□□□□ -1.73
CALD1-221ENST00000489019 ZNF648Q5T619 568 aaPredicted RBP4.23□□□□□ -1.73
CALD1-221ENST00000489019 DCAF15Q66K64 600 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 ZPBP2Q6X784 338 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 ZNF655Q8N720 491 aaPredicted RBP4.23□□□□□ -1.73
CALD1-221ENST00000489019 PDZD8Q8NEN9 1154 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 LINC01599Q8WXQ3 324 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 MYLIPQ8WY64 445 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 CCDC120Q96HB5 630 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 SHDQ96IW2 340 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 SPATA32Q96LK8 384 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 GOLGA2P5Q9HBQ8 144 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 FAM86C1Q9NVL1 165 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 GFOD1Q9NXC2 390 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 TCFL5Q9UL49 500 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms