RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLIC4-202ENST00000488683 DDAH1O94760 285 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 SLC10A5Q5PT55 438 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 ZNF771Q7L3S4 317 aaPredicted RBP14.39□□□□□ -0.11
CLIC4-202ENST00000488683 MAPKAPK5Q8IW41 473 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 LRRC15Q8TF66 581 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 VAT1LQ9HCJ6 419 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 ANKIB1Q9P2G1 1089 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 DACH1Q9UI36 760 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 STX8Q9UNK0 236 aa14.39□□□□□ -0.11
CLIC4-202ENST00000488683 CCDC88AQ3V6T2 1871 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 ARHGAP6O43182 974 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 SCG2P13521 617 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 BARGINQ6ZT62 677 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 DZIP1Q86YF9 867 aaKnown RBP14.38□□□□□ -0.11
CLIC4-202ENST00000488683 TGFBRAP1Q8WUH2 860 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 TMEM60Q9H2L4 133 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 PUF60Q9UHX1 559 aaKnown RBP14.38□□□□□ -0.11
CLIC4-202ENST00000488683 ERICH4A6NGS2 130 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 ORC4O43929 436 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 PMS1P54277 932 aaKnown RBP14.38□□□□□ -0.11
CLIC4-202ENST00000488683 CCDC12Q8WUD4 166 aaPredicted RBP14.38□□□□□ -0.11
CLIC4-202ENST00000488683 SETDB2Q96T68 719 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 PHLPP2Q6ZVD8 1323 aa14.38□□□□□ -0.11
CLIC4-202ENST00000488683 A0A1B0GTH6 734 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CALM1P0DP23 149 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CALM2P0DP24 149 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CALM3P0DP25 149 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 ERCC5P28715 1186 aaPredicted RBP14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CASQ1P31415 396 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 USP5P45974 858 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 ATP2C1P98194 919 aaPredicted RBP14.37□□□□□ -0.11
CLIC4-202ENST00000488683 INF2Q27J81 1249 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 UBXN4Q92575 508 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 HPS3Q969F9 1004 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 HEATR3Q7Z4Q2 680 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
CLIC4-202ENST00000488683 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
CLIC4-202ENST00000488683 TRIM10Q9UDY6 481 aa14.37□□□□□ -0.11
CLIC4-202ENST00000488683 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
CLIC4-202ENST00000488683 POLR3GO15318 223 aaPredicted RBP14.36□□□□□ -0.11
CLIC4-202ENST00000488683 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
CLIC4-202ENST00000488683 E2F4Q16254 413 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 CLEC10AQ8IUN9 316 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 AKR1B15C9JRZ8 316 aaPredicted RBP14.36□□□□□ -0.11
CLIC4-202ENST00000488683 SEMA3EO15041 775 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 CYTH3O43739 400 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 GYPCP04921 128 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 PNMA1Q8ND90 353 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 BRMS1Q9HCU9 246 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 ADD3Q9UEY8 706 aaKnown RBP14.36□□□□□ -0.11
CLIC4-202ENST00000488683 FHOD1Q9Y613 1164 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 SBF2Q86WG5 1849 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
CLIC4-202ENST00000488683 CCP110O43303 1012 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 STX10O60499 249 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 H2AFXP16104 143 aaPredicted RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 TM4SF1P30408 202 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 GYS2P54840 703 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 KRT31Q15323 416 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 PFKFB3Q16875 520 aaPredicted RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 SPATA1Q5VX52 437 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 KIFC2Q96AC6 838 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 MAST2Q6P0Q8 1798 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 IRS2Q9Y4H2 1338 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 ZNF831Q5JPB2 1677 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 TNRC6CQ9HCJ0 1690 aaKnown RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 TADA3O75528 432 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 PRCPP42785 496 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 EIF6P56537 245 aaKnown RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 CDKAL1Q5VV42 579 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 KAT14Q9H8E8 782 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 NARFQ9UHQ1 456 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 ZSCAN12O43309 604 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 SASH3O75995 380 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 KLK7P49862 253 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 PPFIBP1Q86W92 1011 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 NELFBQ8WX92 580 aa14.35□□□□□ -0.11
CLIC4-202ENST00000488683 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
CLIC4-202ENST00000488683 N4BP3O15049 544 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 ZPR1O75312 459 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 ERVK-24P63145 666 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 PPP2R3AQ06190 1150 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 KRT222Q8N1A0 295 aa14.34□□□□□ -0.11
CLIC4-202ENST00000488683 GSDMAQ96QA5 445 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms