RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 KCNA4P22459 653 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 DDIT3P35638 169 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 NUCB2P80303 420 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 ME3Q16798 604 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 C12orf60Q5U649 245 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 MAPKAPK5Q8IW41 473 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 CCDC83Q8IWF9 413 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 ZNF274Q96GC6 653 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 LRRC2Q9BYS8 371 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 ZNF287Q9HBT7 754 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 SMC3Q9UQE7 1217 aa14.11□□□□□ -0.15
HLA-DOB-209ENST00000488325 ROBO3Q96MS0 1386 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 NAV1Q8NEY1 1877 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 ERICH2A1L162 156 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 ORC4O43929 436 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 FGRP09769 529 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 INPP5BP32019 993 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 CACNB3P54284 484 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 ANTXR2P58335 489 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 GPAT2Q6NUI2 795 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 FLT1P17948 1338 aa14.1□□□□□ -0.15
HLA-DOB-209ENST00000488325 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 SH2B2O14492 632 aaPredicted RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 IFIT3O14879 490 aaKnown RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 PFKFB2O60825 505 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 KDM4AO75164 1064 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 LARGE1O95461 756 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 LIFRP42702 1097 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 EVCP57679 992 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 APOBRQ0VD83 1088 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 COL9A3Q14050 684 aaPredicted RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 TMEM67Q5HYA8 995 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 CYB5R4Q7L1T6 521 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 TMTC2Q8N394 836 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 HOOK2Q96ED9 719 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 UBAC1Q9BSL1 405 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 HMX1Q9NP08 348 aaPredicted RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 OGDHLQ9ULD0 1010 aa14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
HLA-DOB-209ENST00000488325 HMGCRP04035 888 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 LRRC26Q2I0M4 334 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 CCDC178Q5BJE1 867 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 DCAF15Q66K64 600 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 CDC42EP5Q6NZY7 148 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 TTC6Q86TZ1 520 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 GTF3C6Q969F1 213 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 COA7Q96BR5 231 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 LLPHQ9BRT6 129 aaKnown RBP14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZNF341Q9BYN7 854 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 ZSWIM5Q9P217 1185 aa14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
HLA-DOB-209ENST00000488325 KLF18A0A0U1RQI7 1052 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 CCDC69A6NI79 296 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 RANBP6O60518 1105 aaKnown RBP14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 CYP2D6P10635 497 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 TRIM32Q13049 653 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 STK3Q13188 491 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 WTAPQ15007 396 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 NECAB1Q8N987 351 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 TMOD2Q9NZR1 351 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 BDP1A6H8Y1 2624 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 DOCK3Q8IZD9 2030 aa14.07□□□□□ -0.16
HLA-DOB-209ENST00000488325 NCOR1O75376 2440 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 GOLGA8BA8MQT2 603 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 HLA-DOAP06340 250 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 COL6A1P12109 1028 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 PDIA3P30101 505 aaKnown RBP14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 RAB3GAP1Q15042 981 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 SGMS1Q86VZ5 419 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 INCENPQ9NQS7 918 aa14.06□□□□□ -0.16
HLA-DOB-209ENST00000488325 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 TSPY2A6NKD2 308 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 PDCP20941 246 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 RCAN1P53805 252 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 ST3GAL1Q11201 340 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 PICALMQ13492 652 aa14.05□□□□□ -0.16
HLA-DOB-209ENST00000488325 CPLX2Q6PUV4 134 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms