RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SEPT4O43236 478 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 RAD21O60216 631 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
TRIM50-203ENST00000488217 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
TRIM50-203ENST00000488217 GPR153Q6NV75 609 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 RIOX2Q8IUF8 465 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 TDHQ8IZJ6 230 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 STK11IPQ8N1F8 1099 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 APPBP2Q92624 585 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 MAML3Q96JK9 1138 aa18.34■□□□□ 0.53
TRIM50-203ENST00000488217 PATL2C9JE40 543 aaKnown RBP18.33■□□□□ 0.52
TRIM50-203ENST00000488217 F5H6K3 240 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 RASA1P20936 1047 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 ATN1P54259 1190 aaPredicted RBP18.33■□□□□ 0.52
TRIM50-203ENST00000488217 KLRC3Q07444 240 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 FAM83BQ5T0W9 1011 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 ANO1Q5XXA6 986 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 TSHZ3Q63HK5 1081 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
TRIM50-203ENST00000488217 MMP19Q99542 508 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 NYAP2Q9P242 653 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
TRIM50-203ENST00000488217 APPP05067 770 aa18.32■□□□□ 0.52
TRIM50-203ENST00000488217 GNAT2P19087 354 aa18.32■□□□□ 0.52
TRIM50-203ENST00000488217 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
TRIM50-203ENST00000488217 KCTD2Q14681 263 aa18.32■□□□□ 0.52
TRIM50-203ENST00000488217 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
TRIM50-203ENST00000488217 DIS3Q9Y2L1 958 aaKnown RBP18.32■□□□□ 0.52
TRIM50-203ENST00000488217 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 GPAA1O43292 621 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 PGK2P07205 417 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 SLC39A5Q6ZMH5 540 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 MKL1Q969V6 931 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
TRIM50-203ENST00000488217 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
TRIM50-203ENST00000488217 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
TRIM50-203ENST00000488217 COPB2P35606 906 aa18.3■□□□□ 0.52
TRIM50-203ENST00000488217 ZNF792Q3KQV3 632 aa18.3■□□□□ 0.52
TRIM50-203ENST00000488217 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
TRIM50-203ENST00000488217 PRPF38AQ8NAV1 312 aaKnown RBP18.3■□□□□ 0.52
TRIM50-203ENST00000488217 REPS2Q8NFH8 660 aa18.3■□□□□ 0.52
TRIM50-203ENST00000488217 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
TRIM50-203ENST00000488217 TINF2Q9BSI4 451 aa18.3■□□□□ 0.52
TRIM50-203ENST00000488217 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
TRIM50-203ENST00000488217 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 M0R2C6 588 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 ERC2O15083 957 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 TDO2P48775 406 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 RTP1P59025 263 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 SLF1Q9BQI6 1058 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 PRKAG2Q9UGJ0 569 aa18.29■□□□□ 0.52
TRIM50-203ENST00000488217 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 NDUFB10O96000 172 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 LRRC41Q15345 812 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 DEFB123Q8N688 67 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 NACAP1Q9BZK3 213 aa18.28■□□□□ 0.52
TRIM50-203ENST00000488217 ZBED4O75132 1171 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 PRDM1O75626 825 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 FERMT2Q96AC1 680 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
TRIM50-203ENST00000488217 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 EPB41L4AQ9HCS5 686 aaPredicted RBP18.27■□□□□ 0.52
TRIM50-203ENST00000488217 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 ATP11BQ9Y2G3 1177 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 RIPK3Q9Y572 518 aa18.27■□□□□ 0.52
TRIM50-203ENST00000488217 RARBP10826 455 aa18.26■□□□□ 0.51
TRIM50-203ENST00000488217 TAL1P17542 331 aaPredicted RBP18.26■□□□□ 0.51
TRIM50-203ENST00000488217 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
TRIM50-203ENST00000488217 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
TRIM50-203ENST00000488217 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
TRIM50-203ENST00000488217 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
TRIM50-203ENST00000488217 DDX60LQ5H9U9 1706 aaKnown RBP18.26■□□□□ 0.51
TRIM50-203ENST00000488217 ATP2A1O14983 1001 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 TTLL1O95922 423 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
TRIM50-203ENST00000488217 ZNF865P0CJ78 1059 aaPredicted RBP18.25■□□□□ 0.51
TRIM50-203ENST00000488217 SLC4A3P48751 1232 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 PDE4BQ07343 736 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 C1orf53Q5VUE5 145 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 SNRNP48Q6IEG0 339 aaKnown RBP18.25■□□□□ 0.51
TRIM50-203ENST00000488217 RNF180Q86T96 592 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
TRIM50-203ENST00000488217 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 OTUD7AQ8TE49 926 aaPredicted RBP18.25■□□□□ 0.51
TRIM50-203ENST00000488217 KIFC2Q96AC6 838 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 CEP95Q96GE4 821 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 SYNPO2Q9UMS6 1093 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 CNPY2Q9Y2B0 182 aa18.25■□□□□ 0.51
TRIM50-203ENST00000488217 TSPY3P0CV98 308 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 TSPY8P0CW00 308 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms