RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 NOP56O00567 594 aaKnown RBP13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 SCRN1Q12765 414 aa13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 INF2Q27J81 1249 aa13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 VPS36Q86VN1 386 aa13.06□□□□□ -0.32
LDLRAP1-207ENST00000488127 MEGF6O75095 1541 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 CCDC121Q6ZUS5 278 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 CCDC114Q96M63 670 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 SPAG5Q96R06 1193 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 PSTPIP2Q9H939 334 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 MED23Q9ULK4 1368 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 PFKFB2O60825 505 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 ZNF75DP51815 510 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 ERCC3P19447 782 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 PODNQ7Z5L7 613 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 FAM114A1Q8IWE2 563 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 SLC44A5Q8NCS7 719 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
LDLRAP1-207ENST00000488127 CRKP46108 304 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 ATG9AQ7Z3C6 839 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 SPON1Q9HCB6 807 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 RNF181Q9P0P0 153 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 NOP2P46087 812 aaKnown RBP13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CAPZA3Q96KX2 299 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 DCCP43146 1447 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CHGBP05060 677 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 TUBBP07437 444 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 SCG2P13521 617 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 TUBB4BP68371 445 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 ARID5AQ03989 594 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 DYMQ7RTS9 669 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 FAM76AQ8TAV0 307 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 MACROD2A1Z1Q3 448 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CYLC1P35663 651 aaPredicted RBP13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CALCRLQ16602 461 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 ZSCAN26Q16670 478 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■□ 24.1
LDLRAP1-207ENST00000488127 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
LDLRAP1-207ENST00000488127 CCDC169A6NNP5 214 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 KRT13P13646 458 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 UBXN2AP68543 259 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 ANKRD35Q8N283 1001 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 RASGRP4Q8TDF6 673 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 OAS2P29728 719 aaKnown RBP13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 NAA25Q14CX7 972 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 SUPT20HL1Q3ZLR7 823 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 PRR16Q569H4 304 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
LDLRAP1-207ENST00000488127 ELP1O95163 1332 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 TTLL1O95922 423 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 CDK8P49336 464 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 PLCD1P51178 756 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 SLC15A2Q16348 729 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 KANSL2Q9H9L4 492 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 NOD1Q9Y239 953 aa13.02□□□□□ -0.32
LDLRAP1-207ENST00000488127 NTSR2O95665 410 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 CA8P35219 290 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 PDE4DQ08499 809 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 ATL3Q6DD88 541 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 BAG1Q99933 345 aaPredicted RBP13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 DEPDC5O75140 1603 aa13.02□□□□□ -0.33
LDLRAP1-207ENST00000488127 GH2P01242 217 aa13.01□□□□□ -0.33
LDLRAP1-207ENST00000488127 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms