RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 FBXO28Q9NVF7 368 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 NEDD4P46934 1319 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
HMG20B-212ENST00000487894 ZNF213O14771 459 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 PCP11498 1178 aaKnown RBP20.17■□□□□ 0.82
HMG20B-212ENST00000487894 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 SLAIN1Q8ND83 568 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 GMCL1P1Q8NEA9 526 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 NKX2-3Q8TAU0 364 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 GJD2Q9UKL4 321 aa20.17■□□□□ 0.82
HMG20B-212ENST00000487894 SGSM2O43147 1006 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 ADCY3O60266 1144 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
HMG20B-212ENST00000487894 NOVP48745 357 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 RGS19P49795 217 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 CCNA1P78396 465 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 GPR142Q7Z601 462 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 MB21D1Q8N884 522 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 PPP1R9AQ9ULJ8 1098 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 ADAMTS5Q9UNA0 930 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 STX8Q9UNK0 236 aa20.16■□□□□ 0.82
HMG20B-212ENST00000487894 ELNP15502 786 aa20.15■□□□□ 0.82
HMG20B-212ENST00000487894 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
HMG20B-212ENST00000487894 SAMD1Q6SPF0 538 aaPredicted RBP20.15■□□□□ 0.82
HMG20B-212ENST00000487894 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
HMG20B-212ENST00000487894 FRMPD3Q5JV73 1810 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 PTH1RQ03431 593 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
HMG20B-212ENST00000487894 BMP2KLQ5H9B9 411 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 PLEKHH3Q7Z736 793 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 CCAR1Q8IX12 1150 aaKnown RBP20.14■□□□□ 0.81
HMG20B-212ENST00000487894 PXYLP1Q8TE99 480 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 SOCS4Q8WXH5 440 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 MOV10L1Q9BXT6 1211 aaKnown RBP20.14■□□□□ 0.81
HMG20B-212ENST00000487894 SPATC1LQ9H0A9 340 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 CTNNA3Q9UI47 895 aa20.14■□□□□ 0.81
HMG20B-212ENST00000487894 POTEFA5A3E0 1075 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 MTFR1Q15390 333 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 MORN1Q5T089 497 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 REPS2Q8NFH8 660 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 USP6NLQ92738 828 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 NUDT12Q9BQG2 462 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 SLF1Q9BQI6 1058 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 TCP11L1Q9NUJ3 509 aa20.13■□□□□ 0.81
HMG20B-212ENST00000487894 VWA5AO00534 786 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
HMG20B-212ENST00000487894 TMEM132BQ14DG7 1078 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 RASGRP2Q7LDG7 609 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 SHCBP1Q8NEM2 672 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 ESR2Q92731 530 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 GMCL1Q96IK5 515 aa20.12■□□□□ 0.81
HMG20B-212ENST00000487894 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
HMG20B-212ENST00000487894 INHAP05111 366 aa20.11■□□□□ 0.81
HMG20B-212ENST00000487894 BMP3P12645 472 aa20.11■□□□□ 0.81
HMG20B-212ENST00000487894 CYP2B6P20813 491 aa20.11■□□□□ 0.81
HMG20B-212ENST00000487894 WDR78Q5VTH9 848 aa20.11■□□□□ 0.81
HMG20B-212ENST00000487894 RCSD1Q6JBY9 416 aa20.11■□□□□ 0.81
HMG20B-212ENST00000487894 ZNF214Q9UL59 606 aaPredicted RBP20.11■□□□□ 0.81
HMG20B-212ENST00000487894 B4E1Z4 1266 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 KDM4AO75164 1064 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 ERCC3P19447 782 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 PTPREP23469 700 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 NT5C2P49902 561 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 UBXN2AP68543 259 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 GRB14Q14449 540 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 PLS1Q14651 629 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 PRPF38AQ8NAV1 312 aaKnown RBP20.1■□□□□ 0.81
HMG20B-212ENST00000487894 TRIB2Q92519 343 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 TMEM47Q9BQJ4 181 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 BIN2Q9UBW5 565 aaPredicted RBP20.1■□□□□ 0.81
HMG20B-212ENST00000487894 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
HMG20B-212ENST00000487894 MKI67P46013 3256 aaKnown RBP20.1■□□□□ 0.81
HMG20B-212ENST00000487894 SMCHD1A6NHR9 2005 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 HMGCRP04035 888 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 TOP1P11387 765 aaKnown RBP20.09■□□□□ 0.81
HMG20B-212ENST00000487894 XRCC5P13010 732 aaKnown RBP20.09■□□□□ 0.81
HMG20B-212ENST00000487894 CCL5P13501 91 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 MCCP23508 829 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 RGS2P41220 211 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 SLC1A4P43007 532 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 MAP2K5Q13163 448 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 CHMP4CQ96CF2 233 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 APBA2Q99767 749 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 ZKSCAN3Q9BRR0 538 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 ESYT1Q9BSJ8 1104 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 TMEM106CQ9BVX2 250 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 IVNS1ABPQ9Y6Y0 642 aa20.09■□□□□ 0.81
HMG20B-212ENST00000487894 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
HMG20B-212ENST00000487894 MYH6P13533 1939 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 TMEM232C9JQI7 657 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 CYP21A2P08686 494 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 NCAPG2Q86XI2 1143 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 RIOX2Q8IUF8 465 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 MAP4K1Q92918 833 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 KIFC2Q96AC6 838 aa20.08■□□□□ 0.81
HMG20B-212ENST00000487894 UNC93B1Q9H1C4 597 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms