RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 KIF28PB7ZC32 967 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 NOP2P46087 812 aaKnown RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 GRAMD1CQ8IYS0 662 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
TRA2B-214ENST00000487615 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
TRA2B-214ENST00000487615 ERICH4A6NGS2 130 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 IGDCC4Q8TDY8 1250 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 PUF60Q9UHX1 559 aaKnown RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 RGPD8O14715 1765 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 NTSR2O95665 410 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 MORC3Q14149 939 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 NUP58Q9BVL2 599 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 FRMPD2Q68DX3 1309 aaPredicted RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 RPN1P04843 607 aaKnown RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 ELF2Q15723 593 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 ENOX1Q8TC92 643 aaKnown RBP13.23□□□□□ -0.29
TRA2B-214ENST00000487615 SCNN1DP51172 638 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 ITPK1Q13572 414 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 SKIDA1Q1XH10 827 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
TRA2B-214ENST00000487615 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 TECP42680 631 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 KCNJ12Q14500 433 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
TRA2B-214ENST00000487615 PLA2G4DQ86XP0 818 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 H7C1D1 291 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 LAD1O00515 517 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 APBA3O96018 575 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 CYP2D6P10635 497 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
TRA2B-214ENST00000487615 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 FAM13AO94988 1023 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.295e-10■■□□□ 12.8
TRA2B-214ENST00000487615 FCHSD1Q86WN1 690 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
TRA2B-214ENST00000487615 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 ARHGEF10LQ9HCE6 1279 aa13.22□□□□□ -0.29
TRA2B-214ENST00000487615 PPEF1O14829 653 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 STX10O60499 249 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 HS2ST1Q7LGA3 356 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 ARID5AQ03989 594 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 NAPGQ99747 312 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 CENPHQ9H3R5 247 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 PPP2R2CQ9Y2T4 447 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 ZNF215Q9UL58 517 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-214ENST00000487615 LTN1O94822 1766 aa13.21□□□□□ -0.29
TRA2B-214ENST00000487615 TUBB2AQ13885 445 aa13.21□□□□□ -0.3
TRA2B-214ENST00000487615 MCM6Q14566 821 aa13.21□□□□□ -0.3
TRA2B-214ENST00000487615 BPIFA3Q9BQP9 254 aa13.21□□□□□ -0.3
TRA2B-214ENST00000487615 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.3
TRA2B-214ENST00000487615 OGFRQ9NZT2 677 aa13.21□□□□□ -0.3
TRA2B-214ENST00000487615 TUBBP07437 444 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 CCDC172P0C7W6 258 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 ASPRV1Q53RT3 343 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 TRIM37O94972 964 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SEPT12Q8IYM1 358 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SMYD4Q8IYR2 804 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-214ENST00000487615 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 SLIT3O75094 1523 aa13.2□□□□□ -0.3
TRA2B-214ENST00000487615 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-214ENST00000487615 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.31e-15■□□□□ 8.6
TRA2B-214ENST00000487615 USP8P40818 1118 aa13.19□□□□□ -0.3
TRA2B-214ENST00000487615 ARL6IP4Q66PJ3 421 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms