RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZMYM1Q5SVZ6 1142 aa28.14■■■□□ 2.1
PLOD3-215ENST00000487563 C7orf61Q8IZ16 206 aa28.14■■■□□ 2.1
PLOD3-215ENST00000487563 NAPBQ9H115 298 aa28.14■■■□□ 2.1
PLOD3-215ENST00000487563 PARP14Q460N5 1801 aa28.13■■■□□ 2.09
PLOD3-215ENST00000487563 PRDM1O75626 825 aa28.13■■■□□ 2.09
PLOD3-215ENST00000487563 MNX1P50219 401 aaPredicted RBP28.13■■■□□ 2.09
PLOD3-215ENST00000487563 FXR1P51114 621 aaKnown RBP eCLIP28.13■■■□□ 2.09
PLOD3-215ENST00000487563 NYAP2Q9P242 653 aa28.13■■■□□ 2.09
PLOD3-215ENST00000487563 PPP1R9AQ9ULJ8 1098 aa28.13■■■□□ 2.09
PLOD3-215ENST00000487563 SLC25A27O95847 323 aa28.12■■■□□ 2.09
PLOD3-215ENST00000487563 SLC3A2P08195 630 aaKnown RBP28.12■■■□□ 2.09
PLOD3-215ENST00000487563 HDAC1Q13547 482 aaPredicted RBP28.12■■■□□ 2.09
PLOD3-215ENST00000487563 TMEM132BQ14DG7 1078 aa28.12■■■□□ 2.09
PLOD3-215ENST00000487563 LHX8Q68G74 356 aa28.12■■■□□ 2.09
PLOD3-215ENST00000487563 RBM27Q9P2N5 1060 aaKnown RBP28.12■■■□□ 2.09
PLOD3-215ENST00000487563 SALL3Q9BXA9 1300 aa28.12■■■□□ 2.09
PLOD3-215ENST00000487563 ALPK3Q96L96 1907 aa28.12■■■□□ 2.09
PLOD3-215ENST00000487563 MSCO60682 206 aa28.11■■■□□ 2.09
PLOD3-215ENST00000487563 FCER1AP12319 257 aa28.11■■■□□ 2.09
PLOD3-215ENST00000487563 PDE4BQ07343 736 aa28.11■■■□□ 2.09
PLOD3-215ENST00000487563 ABRAQ8N0Z2 381 aa28.11■■■□□ 2.09
PLOD3-215ENST00000487563 CLIP2Q9UDT6 1046 aa28.11■■■□□ 2.09
PLOD3-215ENST00000487563 DDX20Q9UHI6 824 aaKnown RBP28.11■■■□□ 2.09
PLOD3-215ENST00000487563 OLFML2BQ68BL8 750 aa28.1■■■□□ 2.09
PLOD3-215ENST00000487563 NUP88Q99567 741 aaPredicted RBP28.1■■■□□ 2.09
PLOD3-215ENST00000487563 PCDH10Q9P2E7 1040 aa28.1■■■□□ 2.09
PLOD3-215ENST00000487563 ADAMTS5Q9UNA0 930 aa28.1■■■□□ 2.09
PLOD3-215ENST00000487563 TRIOBPQ9H2D6 2365 aa28.1■■■□□ 2.09
PLOD3-215ENST00000487563 COL11A1P12107 1806 aaPredicted RBP28.09■■■□□ 2.09
PLOD3-215ENST00000487563 F5H6K3 240 aa28.09■■■□□ 2.09
PLOD3-215ENST00000487563 VWA5AO00534 786 aa28.09■■■□□ 2.09
PLOD3-215ENST00000487563 KLRC3Q07444 240 aa28.09■■■□□ 2.09
PLOD3-215ENST00000487563 EVI5LQ96CN4 794 aa28.09■■■□□ 2.09
PLOD3-215ENST00000487563 SLF1Q9BQI6 1058 aa28.09■■■□□ 2.09
PLOD3-215ENST00000487563 FRMPD3Q5JV73 1810 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 COBLO75128 1261 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 NDUFB10O96000 172 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 TSPY3P0CV98 308 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 TSPY8P0CW00 308 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 COPB2P35606 906 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 PPARAQ07869 468 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 RIOX2Q8IUF8 465 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 CEP95Q96GE4 821 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 MMP19Q99542 508 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 PFASO15067 1338 aa28.08■■■□□ 2.09
PLOD3-215ENST00000487563 IGKV6D-41A0A0C4DH26 115 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 CYBAP13498 195 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 STAT3P40763 770 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 PDE1AP54750 535 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 AAMPQ13685 434 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 CCDC129Q6ZRS4 1044 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 STAP2Q9UGK3 403 aa28.07■■■□□ 2.08
PLOD3-215ENST00000487563 ZMYND8Q9ULU4 1186 aaPredicted RBP28.07■■■□□ 2.08
PLOD3-215ENST00000487563 CTDP1Q9Y5B0 961 aaPredicted RBP28.07■■■□□ 2.08
PLOD3-215ENST00000487563 MYH4Q9Y623 1939 aa28.06■■■□□ 2.08
PLOD3-215ENST00000487563 TTLL1O95922 423 aa28.06■■■□□ 2.08
PLOD3-215ENST00000487563 KCTD2Q14681 263 aa28.06■■■□□ 2.08
PLOD3-215ENST00000487563 LRRC47Q8N1G4 583 aaKnown RBP28.06■■■□□ 2.08
PLOD3-215ENST00000487563 TRPV1Q8NER1 839 aa28.06■■■□□ 2.08
PLOD3-215ENST00000487563 MTMR4Q9NYA4 1195 aa28.06■■■□□ 2.08
PLOD3-215ENST00000487563 COL6A1P12109 1028 aa28.05■■■□□ 2.08
PLOD3-215ENST00000487563 MAML3Q96JK9 1138 aa28.05■■■□□ 2.08
PLOD3-215ENST00000487563 ZNF214Q9UL59 606 aaPredicted RBP28.05■■■□□ 2.08
PLOD3-215ENST00000487563 ISY1Q9ULR0 285 aaKnown RBP28.05■■■□□ 2.08
PLOD3-215ENST00000487563 PLIN4Q96Q06 1357 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 FAM47AQ5JRC9 791 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 NEDD1Q8NHV4 660 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 LNPKQ9C0E8 428 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 PRO3102Q9H379 93 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 SYNPO2Q9UMS6 1093 aa28.04■■■□□ 2.08
PLOD3-215ENST00000487563 IGHA2P01877 340 aa28.03■■■□□ 2.08
PLOD3-215ENST00000487563 TFAP4Q01664 338 aa28.03■■■□□ 2.08
PLOD3-215ENST00000487563 PRPF38AQ8NAV1 312 aaKnown RBP28.03■■■□□ 2.08
PLOD3-215ENST00000487563 REPS2Q8NFH8 660 aa28.03■■■□□ 2.08
PLOD3-215ENST00000487563 MKL1Q969V6 931 aa28.03■■■□□ 2.08
PLOD3-215ENST00000487563 TEX13BQ9BXU2 312 aa28.03■■■□□ 2.08
PLOD3-215ENST00000487563 RWDD1Q9H446 243 aaPredicted RBP28.03■■■□□ 2.08
PLOD3-215ENST00000487563 ZBED4O75132 1171 aa28.02■■■□□ 2.08
PLOD3-215ENST00000487563 PGK2P07205 417 aa28.02■■■□□ 2.08
PLOD3-215ENST00000487563 SYN1P17600 705 aa28.02■■■□□ 2.08
PLOD3-215ENST00000487563 SNRNP48Q6IEG0 339 aaKnown RBP28.02■■■□□ 2.08
PLOD3-215ENST00000487563 KIFC2Q96AC6 838 aa28.02■■■□□ 2.08
PLOD3-215ENST00000487563 HELLSQ9NRZ9 838 aa28.02■■■□□ 2.08
PLOD3-215ENST00000487563 DNM1LO00429 736 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 SEPT4O43236 478 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 SLC4A3P48751 1232 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 ANO1Q5XXA6 986 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 GMCL1P1Q8NEA9 526 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 SENP6Q9GZR1 1112 aaPredicted RBP28.01■■■□□ 2.07
PLOD3-215ENST00000487563 FEM1BQ9UK73 627 aa28.01■■■□□ 2.07
PLOD3-215ENST00000487563 A0A1W2PPC1 479 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 TSPY2A6NKD2 308 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 TRIM6-TRIM34B2RNG4 842 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 CTDSPL2Q05D32 466 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 LRRC26Q2I0M4 334 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 PPP4R3BQ5MIZ7 849 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 PRAMEF19Q5SWL8 479 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 SLFN13Q68D06 897 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 B4GALNT3Q6L9W6 998 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 CPXCR1Q8N123 301 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms