RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 ZNF365Q70YC5 407 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 TOX2Q96NM4 488 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 ZBED2Q9BTP6 218 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 KCNH6Q9H252 994 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 COG5Q9UP83 839 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
CDK11A-217ENST00000487462 ACRP10323 421 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 CSF2RAP15509 400 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 POU3F3P20264 500 aaPredicted RBP11.83□□□□□ -0.52
CDK11A-217ENST00000487462 BTDP43251 543 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 RHBDL3P58872 404 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 CCNA1P78396 465 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
CDK11A-217ENST00000487462 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
CDK11A-217ENST00000487462 DMDP11532 3685 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 MYOGP15173 224 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 FOXK2Q01167 660 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 PTGDRQ13258 359 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 HIC1Q14526 733 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 PPP2R2DQ66LE6 453 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 KRT40Q6A162 431 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 PSRC1Q6PGN9 363 aaPredicted RBP11.82□□□□□ -0.52
CDK11A-217ENST00000487462 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 KLHDC4Q8TBB5 520 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 IVNS1ABPQ9Y6Y0 642 aa11.82□□□□□ -0.52
CDK11A-217ENST00000487462 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
CDK11A-217ENST00000487462 DCDC2CA8MYV0 355 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 USP17L10C9JJH3 530 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 RFXAPO00287 272 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 ADORA2AP29274 412 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 RABGGTBP53611 331 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 PRSS12P56730 875 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
CDK11A-217ENST00000487462 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
CDK11A-217ENST00000487462 ZNFX1Q9P2E3 1918 aaKnown RBP11.81□□□□□ -0.52
CDK11A-217ENST00000487462 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 EPOPA6NHQ4 379 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 APAF1O14727 1248 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 COBLO75128 1261 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 PGK1P00558 417 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 ASNSP08243 561 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 SLC5A1P13866 664 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 RABL6Q3YEC7 729 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-217ENST00000487462 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 LPIN2Q92539 896 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 BICC1Q9H694 974 aaKnown RBP11.8□□□□□ -0.52
CDK11A-217ENST00000487462 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-217ENST00000487462 VPS13AQ96RL7 3174 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 MROH7-TTC4A0A0A0MT08 1334 aa11.8□□□□□ -0.52
CDK11A-217ENST00000487462 ROBO3Q96MS0 1386 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDK11A-217ENST00000487462 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 DPP9Q86TI2 863 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 DZIP1Q86YF9 867 aaKnown RBP11.79□□□□□ -0.52
CDK11A-217ENST00000487462 ZNF384Q8TF68 577 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 DNAJC18Q9H819 358 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
CDK11A-217ENST00000487462 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
CDK11A-217ENST00000487462 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
CDK11A-217ENST00000487462 RARBP10826 455 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 RNF180Q86T96 592 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 TMEM199Q8N511 208 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
CDK11A-217ENST00000487462 IL23AQ9NPF7 189 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
CDK11A-217ENST00000487462 CACNA1BQ00975 2339 aa11.77□□□□□ -0.52
CDK11A-217ENST00000487462 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 ADAMTS4O75173 837 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 GDF11O95390 407 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 PHKA1P46020 1223 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 PROX2Q3B8N5 592 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
CDK11A-217ENST00000487462 CATSPERGQ6ZRH7 1159 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms