RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 GNL2Q13823 731 aaKnown RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 AUHQ13825 339 aaKnown RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 ATG4DQ86TL0 474 aaPredicted RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 CPLX3Q8WVH0 158 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 SMARCC1Q92922 1105 aaPredicted RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 GMLQ99445 158 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 MKRN2Q9H000 416 aaKnown RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 RC3H2Q9HBD1 1191 aaKnown RBP6.8□□□□□ -1.32
LINC00888-204ENST00000487386 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 ZNF281Q9Y2X9 895 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 SLC12A7Q9Y666 1083 aa6.8□□□□□ -1.32
LINC00888-204ENST00000487386 FGRP09769 529 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 C7orf61Q8IZ16 206 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 USHBP1Q8N6Y0 703 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 ASCC2Q9H1I8 757 aaPredicted RBP6.79□□□□□ -1.32
LINC00888-204ENST00000487386 CTNND2Q9UQB3 1225 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 PCDHA11Q9Y5I1 949 aa6.79□□□□□ -1.32
LINC00888-204ENST00000487386 PAPLNO95428 1278 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 ARID5AQ03989 594 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 EGR3Q06889 387 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 AXDND1Q5T1B0 1012 aaPredicted RBP6.78□□□□□ -1.32
LINC00888-204ENST00000487386 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 ZNF655Q8N720 491 aaPredicted RBP6.78□□□□□ -1.32
LINC00888-204ENST00000487386 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 ALPK1Q96QP1 1244 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 PCDHB12Q9Y5F1 795 aa6.78□□□□□ -1.32
LINC00888-204ENST00000487386 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
LINC00888-204ENST00000487386 GDNFP39905 211 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 TEKQ02763 1124 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 RALGPS1Q5JS13 557 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 TDRD10Q5VZ19 366 aaKnown RBP6.77□□□□□ -1.33
LINC00888-204ENST00000487386 MCF2L2Q86YR7 1114 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 PHAXQ9H814 394 aaKnown RBP6.77□□□□□ -1.33
LINC00888-204ENST00000487386 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 SLAMF8Q9P0V8 285 aa6.77□□□□□ -1.33
LINC00888-204ENST00000487386 LTKP29376 864 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 DCAF15Q66K64 600 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 RNF111Q6ZNA4 994 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 LINC00116Q8NCU8 138 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 KLHL6Q8WZ60 621 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00888-204ENST00000487386 ADAMTS10Q9H324 1103 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 GFOD1Q9NXC2 390 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 FBXL21Q9UKT6 434 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
LINC00888-204ENST00000487386 CBFA2T2O43439 604 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 TP53P04637 393 aaPredicted RBP6.75□□□□□ -1.33
LINC00888-204ENST00000487386 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC00888-204ENST00000487386 CD247P20963 164 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 ETFBP38117 255 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 CTSKP43235 329 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
LINC00888-204ENST00000487386 GP6Q9HCN6 339 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 TMEM59LQ9UK28 342 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 PCDHB10Q9UN67 800 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
LINC00888-204ENST00000487386 BIN1O00499 593 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 SMAD7O15105 426 aaKnown RBP6.74□□□□□ -1.33
LINC00888-204ENST00000487386 ZGLP1P0C6A0 271 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 ZNF445P59923 1031 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 SLC7A5Q01650 507 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 SP110Q9HB58 689 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 EBF1Q9UH73 591 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 CARMIL2Q6F5E8 1435 aa6.74□□□□□ -1.33
LINC00888-204ENST00000487386 A0A087WZG4 1122 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 TMEM82A0PJX8 343 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 DNAJA1P31689 397 aaKnown RBP6.73□□□□□ -1.33
LINC00888-204ENST00000487386 BMP8BP34820 402 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 PCBP3P57721 371 aaKnown RBP6.73□□□□□ -1.33
LINC00888-204ENST00000487386 NAALADL2Q58DX5 795 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 LINC01599Q8WXQ3 324 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 HAUS7Q99871 368 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 G6PC3Q9BUM1 346 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 ZNF408Q9H9D4 720 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 SUSD2Q9UGT4 822 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 TCFL5Q9UL49 500 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 FHOD1Q9Y613 1164 aa6.73□□□□□ -1.33
LINC00888-204ENST00000487386 HPXP02790 462 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 SYPP08247 313 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 AFMP43652 599 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 TNNI3KQ59H18 835 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 FYB2Q5VWT5 728 aa6.72□□□□□ -1.33
LINC00888-204ENST00000487386 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms