RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
LINC00996-202ENST00000486954 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
LINC00996-202ENST00000486954 CCDC69A6NI79 296 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 GPR25O00155 361 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 FKTNO75072 461 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
LINC00996-202ENST00000486954 STAT2P52630 851 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 ANTXR2P58335 489 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 ANAPC15P60006 121 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 KIF22Q14807 665 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 SEC23AQ15436 765 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 DHX32Q7L7V1 743 aaKnown RBP13.67□□□□□ -0.22
LINC00996-202ENST00000486954 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 FAM160B2Q86V87 743 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
LINC00996-202ENST00000486954 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 CPA4Q9UI42 421 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 FEM1BQ9UK73 627 aa13.67□□□□□ -0.22
LINC00996-202ENST00000486954 ADGRA2Q96PE1 1338 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 SPDYE16A6NNV3 312 aaPredicted RBP13.66□□□□□ -0.22
LINC00996-202ENST00000486954 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 SH2B2O14492 632 aaPredicted RBP13.66□□□□□ -0.22
LINC00996-202ENST00000486954 PDHBP11177 359 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 DSG3P32926 999 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 LBX1P52954 281 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 SP3Q02447 781 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 GPATCH4Q5T3I0 446 aaKnown RBP13.66□□□□□ -0.22
LINC00996-202ENST00000486954 ANKRD13CQ8N6S4 541 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 CHURC1Q8WUH1 139 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 CHMP4CQ96CF2 233 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 ERO1AQ96HE7 468 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 P2RX7Q99572 595 aaKnown RBP13.66□□□□□ -0.22
LINC00996-202ENST00000486954 PAGR1Q9BTK6 254 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
LINC00996-202ENST00000486954 CCNA1P78396 465 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 SYNE3Q6ZMZ3 975 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
LINC00996-202ENST00000486954 KIFC2Q96AC6 838 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 CWC22Q9HCG8 908 aaKnown RBP13.65□□□□□ -0.22
LINC00996-202ENST00000486954 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
LINC00996-202ENST00000486954 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
LINC00996-202ENST00000486954 PARP14Q460N5 1801 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 DDAH1O94760 285 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 SEC24BO95487 1268 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 PARP1P09874 1014 aaKnown RBP13.64□□□□□ -0.23
LINC00996-202ENST00000486954 FDX1P10109 184 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 BCRP11274 1271 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 LIFRP42702 1097 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
LINC00996-202ENST00000486954 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
LINC00996-202ENST00000486954 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 NUP133Q8WUM0 1156 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
LINC00996-202ENST00000486954 ATG4CQ96DT6 458 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 LRRC2Q9BYS8 371 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 R3HDMLQ9H3Y0 253 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
LINC00996-202ENST00000486954 PLA2G6O60733 806 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 ZBED4O75132 1171 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 CALM1P0DP23 149 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 CALM2P0DP24 149 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 CALM3P0DP25 149 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 KIF5BP33176 963 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 FCGRTP55899 365 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 ERVK-24P63145 666 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 PLS1Q14651 629 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 RUFY3Q7L099 469 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 MORF4L1Q9UBU8 362 aa13.63□□□□□ -0.23
LINC00996-202ENST00000486954 VWA5AO00534 786 aa13.62□□□□□ -0.23
LINC00996-202ENST00000486954 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
LINC00996-202ENST00000486954 COPB2P35606 906 aa13.62□□□□□ -0.23
LINC00996-202ENST00000486954 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
LINC00996-202ENST00000486954 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms