RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 SPATC1LQ9H0A9 340 aa18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 IL25Q9H293 177 aa18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
SEMA4D-219ENST00000486935 RAD50Q92878 1312 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 EVI5O60447 810 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 RASA1P20936 1047 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 CCND3P30281 292 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 MFSD14CQ5VZR4 134 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 ANKLE1Q8NAG6 615 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 EPB41L4AQ9HCS5 686 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
SEMA4D-219ENST00000486935 SGSM2O43147 1006 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 ERCC3P19447 782 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 GRB14Q14449 540 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 DPP9Q86TI2 863 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 IFNL3Q8IZI9 196 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 ZNF444Q8N0Y2 327 aaPredicted RBP18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 MB21D1Q8N884 522 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 DOCK3Q8IZD9 2030 aa18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-219ENST00000486935 STRNO43815 780 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 PRDM1O75626 825 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 ZNF589Q86UQ0 364 aaPredicted RBP18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 NCAPG2Q86XI2 1143 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 FBXO28Q9NVF7 368 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
SEMA4D-219ENST00000486935 CCDC171Q6TFL3 1326 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 SEC24BO95487 1268 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 HOXC6P09630 235 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 ADORA2AP29274 412 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 MNX1P50219 401 aaPredicted RBP18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 TMEM132BQ14DG7 1078 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 LHX8Q68G74 356 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 SHCBP1Q8NEM2 672 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 MROH8Q9H579 483 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 C11orf49Q9H6J7 331 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 ZNF287Q9HBT7 754 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
SEMA4D-219ENST00000486935 CNGA1P29973 690 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 CYP2C19P33261 490 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 ANO2Q9NQ90 1003 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 NYAP2Q9P242 653 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 LAMA4Q16363 1823 aa18.28■□□□□ 0.52
SEMA4D-219ENST00000486935 F5H6K3 240 aa18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 REC8O95072 547 aa18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 KLRC3Q07444 240 aa18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 NAPBQ9H115 298 aa18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 ADAMTS5Q9UNA0 930 aa18.27■□□□□ 0.52
SEMA4D-219ENST00000486935 ROBO3Q96MS0 1386 aa18.27■□□□□ 0.51
SEMA4D-219ENST00000486935 VWA5AO00534 786 aa18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 COBLO75128 1261 aa18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 SLC25A27O95847 323 aa18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 SLC3A2P08195 630 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
SEMA4D-219ENST00000486935 IGKV6D-41A0A0C4DH26 115 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 NDUFB10O96000 172 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 FCER1AP12319 257 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 PDE4BQ07343 736 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 PPARAQ07869 468 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 C7orf61Q8IZ16 206 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 ABRAQ8N0Z2 381 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
SEMA4D-219ENST00000486935 TSPY3P0CV98 308 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 TSPY8P0CW00 308 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 STAT3P40763 770 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 FXR1P51114 621 aaKnown RBP eCLIP18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 TFAP4Q01664 338 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 PTH1RQ03431 593 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 VPS53Q5VIR6 699 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 OLFML2BQ68BL8 750 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 MKL1Q969V6 931 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 CEP95Q96GE4 821 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 MMP19Q99542 508 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 LSG1Q9H089 658 aaKnown RBP18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 MTMR4Q9NYA4 1195 aa18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 DDX20Q9UHI6 824 aaKnown RBP18.24■□□□□ 0.51
SEMA4D-219ENST00000486935 TTLL1O95922 423 aa18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 IGHA2P01877 340 aa18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 RIOX2Q8IUF8 465 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms