RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 HMGCS2P54868 508 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-210ENST00000486889 EVX2Q03828 476 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 SEC23AQ15436 765 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 ZYXQ15942 572 aaKnown RBP11.35□□□□□ -0.59
CTPS1-210ENST00000486889 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 TRIM22Q8IYM9 498 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 LRRC47Q8N1G4 583 aaKnown RBP11.35□□□□□ -0.59
CTPS1-210ENST00000486889 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 ZCCHC17Q9NP64 241 aaKnown RBP11.35□□□□□ -0.59
CTPS1-210ENST00000486889 HOXC10Q9NYD6 342 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 FZD1Q9UP38 647 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 KCNH4Q9UQ05 1017 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.35□□□□□ -0.59
CTPS1-210ENST00000486889 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
CTPS1-210ENST00000486889 CCL15-CCL14A0A0B4J2E2 113 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 A0A0G2JLL6 359 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 SMIM22K7EJ46 135 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 SLC10A3P09131 477 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 XBP1P17861 261 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 MAP2K2P36507 400 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 ANTXR2P58335 489 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 CCL15Q16663 113 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 RTN1Q16799 776 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 CYP4F22Q6NT55 531 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 PRRT2Q7Z6L0 340 aaPredicted RBP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 FANCBQ8NB91 859 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 WASF1Q92558 559 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 CAPNS2Q96L46 248 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 C12orf42Q96LP6 360 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 TCEANC2Q96MN5 208 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 LRRC2Q9BYS8 371 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 AGXT2Q9BYV1 514 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 SEC63Q9UGP8 760 aaKnown RBP11.34□□□□□ -0.59
CTPS1-210ENST00000486889 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 SLC45A1Q9Y2W3 748 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
CTPS1-210ENST00000486889 ZBED4O75132 1171 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 CPA1P15085 419 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 SMARCA1P28370 1054 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
CTPS1-210ENST00000486889 COG2Q14746 738 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 RASAL3Q86YV0 1011 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
CTPS1-210ENST00000486889 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
CTPS1-210ENST00000486889 SMCR8Q8TEV9 937 aaPredicted RBP11.33□□□□□ -0.6
CTPS1-210ENST00000486889 PARK7Q99497 189 aaKnown RBP11.33□□□□□ -0.6
CTPS1-210ENST00000486889 MYPNQ86TC9 1320 aa11.33□□□□□ -0.6
CTPS1-210ENST00000486889 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 PLA2G6O60733 806 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 FLOT1O75955 427 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 NDUFB10O96000 172 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 SLURP2P0DP57 97 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 PDHBP11177 359 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
CTPS1-210ENST00000486889 VCAM1P19320 739 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 LBX1P52954 281 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 EVCP57679 992 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 GRM4Q14833 912 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
CTPS1-210ENST00000486889 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 SPICE1Q8N0Z3 855 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 SNX21Q969T3 373 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
CTPS1-210ENST00000486889 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
CTPS1-210ENST00000486889 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
CTPS1-210ENST00000486889 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 COPB2P35606 906 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 HMGN5P82970 282 aaKnown RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 ZNF543Q08ER8 600 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 TROAPQ12815 778 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 STK3Q13188 491 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 KIF2CQ99661 725 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
CTPS1-210ENST00000486889 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
CTPS1-210ENST00000486889 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms