RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TCP11L1Q9NUJ3 509 aa20.46■□□□□ 0.87
PDLIM7-207ENST00000486828 GNAQP50148 359 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 GRIK5Q16478 980 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 HSP90AA4PQ58FG1 418 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 PDCL2Q8N4E4 241 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 ADRA2BP18089 450 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 PRR5LQ6MZQ0 368 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 BLIDQ8IZY5 108 aa20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 PYM1Q9BRP8 204 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-207ENST00000486828 ADAMTS3O15072 1205 aa20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 GPSM2P81274 684 aa20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 FCHSD1Q86WN1 690 aa20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 CERS3Q8IU89 383 aa20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 TGFBRAP1Q8WUH2 860 aa20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 SAMSN1Q9NSI8 373 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-207ENST00000486828 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 MCM7P33993 719 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 CUL4BQ13620 913 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 E2F4Q16254 413 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 ZNF444Q8N0Y2 327 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 STAG2Q8N3U4 1231 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 GPR101Q96P66 508 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 RTFDC1Q9BY42 306 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 MAD2L2Q9UI95 211 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 PCDHA4Q9UN74 947 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 PTPN21Q16825 1174 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 SPATA1Q5VX52 437 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 ARL6IP4Q66PJ3 421 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 SPECC1LQ69YQ0 1117 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 TMEM139Q8IV31 216 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
PDLIM7-207ENST00000486828 USP17L3A6NCW0 530 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 USP17L4A6NCW7 530 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 CD44P16070 742 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 CASP1P29466 404 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 IL17AQ16552 155 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 CRY2Q49AN0 593 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 USP17L1Q7RTZ2 530 aa20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 GPKOWQ92917 476 aaPredicted RBP eCLIP20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 BAZ2BQ9UIF8 2168 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-207ENST00000486828 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 SYNRGQ9UMZ2 1314 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 ARHGAP6O43182 974 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 GOLGA8FQ08AF8 430 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 GOLGA8DPQ0D2H9 430 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 NR1I3Q14994 352 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 CD209Q9NNX6 404 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 A0A1B0GTH6 734 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 UFL1O94874 794 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 RASA1P20936 1047 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 LONP1P36776 959 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 PDXDC2PQ6P474 469 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 MAPKAPK5Q8IW41 473 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 C4orf32Q8N8J7 132 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 SLC44A5Q8NCS7 719 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 ARID3AQ99856 593 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 ZNF287Q9HBT7 754 aa20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 ZNF215Q9UL58 517 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-207ENST00000486828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 PPP1R3GB7ZBB8 358 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 M0R2N6 131 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 IL1R1P14778 569 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 BTDP43251 543 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 PPP4R3BQ5MIZ7 849 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 SYT10Q6XYQ8 523 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 DAGLBQ8NCG7 672 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 UBR3Q6ZT12 1888 aa20.4■□□□□ 0.86
PDLIM7-207ENST00000486828 GPR75-ASB3A0A0A6YYF3 556 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 ST5P78524 1137 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 NAA30Q147X3 362 aaPredicted RBP20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 SLC35G1Q2M3R5 365 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 GALNT17Q6IS24 598 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 APTXQ7Z2E3 356 aaKnown RBP20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 TC2NQ8N9U0 490 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 CCDC148Q8NFR7 591 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 TMEM47Q9BQJ4 181 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 L2HGDHQ9H9P8 463 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 SAP30BPQ9UHR5 308 aaKnown RBP20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 GGA1Q9UJY5 639 aa20.39■□□□□ 0.86
PDLIM7-207ENST00000486828 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 PALM3A6NDB9 673 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 GTPBP6O43824 516 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 SLU7O95391 586 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 CDKAL1Q5VV42 579 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 WWC2Q6AWC2 1192 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 KLHL10Q6JEL2 608 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 TYW1BQ6NUM6 668 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 FAM177A1Q8N128 213 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 BAG1Q99933 345 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 LZTS2Q9BRK4 669 aa20.39■□□□□ 0.85
PDLIM7-207ENST00000486828 ZSCAN12O43309 604 aa20.38■□□□□ 0.85
PDLIM7-207ENST00000486828 CYTH3O43739 400 aa20.38■□□□□ 0.85
PDLIM7-207ENST00000486828 STX10O60499 249 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms