RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TMTC2Q8N394 836 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 ZNF280CQ8ND82 737 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 MYL10Q9BUA6 226 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 ARHGAP39Q9C0H5 1083 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 ARHGEF10LQ9HCE6 1279 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 TMX2Q9Y320 296 aa14.96□□□□□ -0.01
HDAC6-229ENST00000486665 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 ANKRD1Q15327 319 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 TAF1CQ15572 869 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-229ENST00000486665 ZYXQ15942 572 aaKnown RBP14.95□□□□□ -0.02
HDAC6-229ENST00000486665 RASGRP2Q7LDG7 609 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 ZNF654Q8IZM8 581 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 AS3MTQ9HBK9 375 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 MTMR7Q9Y216 660 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
HDAC6-229ENST00000486665 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
HDAC6-229ENST00000486665 ATAD5Q96QE3 1844 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 USP17L10C9JJH3 530 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 F5H6K3 240 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 IRF6O14896 467 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 LARGE1O95461 756 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 RXRAP19793 462 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 PDIA3P30101 505 aaKnown RBP14.94□□□□□ -0.02
HDAC6-229ENST00000486665 BACE1P56817 501 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 KLRC3Q07444 240 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 TROAPQ12815 778 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 PPIL2Q13356 520 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 MTMR2Q13614 643 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 ME3Q16798 604 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 SLFN13Q68D06 897 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 APOA5Q6Q788 366 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 CATIPQ7Z7H3 387 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 EMILIN3Q9NT22 766 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 NAP1L2Q9ULW6 460 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-229ENST00000486665 LIMCH1Q9UPQ0 1083 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 SLC12A7Q9Y666 1083 aa14.94□□□□□ -0.02
HDAC6-229ENST00000486665 ZBTB43O43298 467 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 NDUFB10O96000 172 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 GTF2A2P52657 109 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 GMCL1P1Q8NEA9 526 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 SNX21Q969T3 373 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 ZNF274Q96GC6 653 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-229ENST00000486665 ZNF333Q96JL9 665 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 FEZ1Q99689 392 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 TBC1D2Q9BYX2 928 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 VCPKMTQ9H867 229 aa14.93□□□□□ -0.02
HDAC6-229ENST00000486665 GOLGA8BA8MQT2 603 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 BTBD19C9JJ37 291 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 CXCL11O14625 94 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 RAD21O60216 631 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-229ENST00000486665 MYCP01106 439 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-229ENST00000486665 HMGCS2P54868 508 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 CCT2P78371 535 aaKnown RBP14.92□□□□□ -0.02
HDAC6-229ENST00000486665 STK3Q13188 491 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 USP17L2Q6R6M4 530 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 NECAB1Q8N987 351 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-229ENST00000486665 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 ZFYVE28Q9HCC9 887 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 FAM217BQ9NTX9 383 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-229ENST00000486665 SYNPO2Q9UMS6 1093 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 KCNH4Q9UQ05 1017 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 PHIPQ8WWQ0 1821 aa14.92□□□□□ -0.02
HDAC6-229ENST00000486665 C19orf81C9J6K1 198 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 PFKFB2O60825 505 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 DDAH1O94760 285 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 SNHG28P0DPA3 235 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 PDHBP11177 359 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 CTGFP29279 349 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 MCM2P49736 904 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 ST3GAL1Q11201 340 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 MOGSQ13724 837 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 GRM4Q14833 912 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 HABP4Q5JVS0 413 aaKnown RBP14.91□□□□□ -0.02
HDAC6-229ENST00000486665 MICU3Q86XE3 530 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 STAG2Q8N3U4 1231 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 FANCBQ8NB91 859 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 TMX3Q96JJ7 454 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 NCOA5Q9HCD5 579 aaKnown RBP14.91□□□□□ -0.02
HDAC6-229ENST00000486665 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 CEP290O15078 2479 aa14.91□□□□□ -0.02
HDAC6-229ENST00000486665 A0A0G2JLL6 359 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-229ENST00000486665 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-229ENST00000486665 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
HDAC6-229ENST00000486665 DTNBO60941 627 aa14.9□□□□□ -0.02
HDAC6-229ENST00000486665 GOLGA8HP0CJ92 632 aa14.9□□□□□ -0.02
HDAC6-229ENST00000486665 CDC27P30260 824 aa14.9□□□□□ -0.02
HDAC6-229ENST00000486665 ADD1P35611 737 aaKnown RBP14.9□□□□□ -0.02
HDAC6-229ENST00000486665 METAP2P50579 478 aaKnown RBP eCLIP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms