RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 PLIN1O60240 522 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 MAP2K3P46734 347 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 GYG1P46976 350 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 SMTNP53814 917 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 IFIT5Q13325 482 aaKnown RBP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 VGLL4Q14135 290 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 TAF1CQ15572 869 aaPredicted RBP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 GRIK5Q16478 980 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 CCL15Q16663 113 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 MFSD14BQ5SR56 506 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 OTUD7BQ6GQQ9 843 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 FAM43AQ8N2R8 423 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 BEND7Q8N7W2 519 aaPredicted RBP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 ARHGAP39Q9C0H5 1083 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 TMEM39BQ9GZU3 492 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 TTF2Q9UNY4 1162 aaKnown RBP7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
NECTIN3-208ENST00000486596 FAM205AQ6ZU69 1335 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 TCP10L2B9ZVM9 353 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 MSX1P28360 303 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 CRKP46108 304 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 CACNB3P54284 484 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 SLC9C1Q4G0N8 1177 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 BEND3Q5T5X7 828 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 TDRD7Q8NHU6 1098 aaKnown RBP7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 SH3TC2Q8TF17 1288 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 GLMNQ92990 594 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 NIFKQ9BYG3 293 aaKnown RBP7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 SERPINA10Q9UK55 444 aa7.57□□□□□ -1.2
NECTIN3-208ENST00000486596 A6NJY4 79 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 BACH1O14867 736 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 VAMP4O75379 141 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 CTGFP29279 349 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 TNFAIP1Q13829 316 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 CCDC57Q2TAC2 916 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 GPAT2Q6NUI2 795 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 TRIM50Q86XT4 487 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 NEDD1Q8NHV4 660 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 FAM84BQ96KN1 310 aaPredicted RBP7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 ZFYVE28Q9HCC9 887 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 CNNM1Q9NRU3 951 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 PHF24Q9UPV7 400 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 SZT2Q5T011 3432 aa7.56□□□□□ -1.2
NECTIN3-208ENST00000486596 IL16Q14005 1332 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 H0YGN5 161 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 GRM8O00222 908 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 ATP9BO43861 1147 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 TLR2O60603 784 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 HIBADHP31937 336 aaKnown RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 GTF2A2P52657 109 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 EXOSC9Q06265 439 aaKnown RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 SLC4A8Q2Y0W8 1093 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 TAF7LQ5H9L4 462 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 EFHC2Q5JST6 749 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 ZKSCAN4Q969J2 545 aaPredicted RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 KAZALD1Q96I82 304 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 OXCT2Q9BYC2 517 aaPredicted RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 IQSEC3Q9UPP2 1182 aaPredicted RBP7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 CSADQ9Y600 493 aa7.55□□□□□ -1.2
NECTIN3-208ENST00000486596 TNNI2P48788 182 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 UBE4AQ14139 1066 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 MTFR1Q15390 333 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 SUCLG2Q96I99 432 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 WRNIP1Q96S55 665 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 ZNF358Q9NW07 568 aa7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 ATXN7L1Q9ULK2 861 aaPredicted RBP7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
NECTIN3-208ENST00000486596 CETPP11597 493 aa7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 CHAF1AQ13111 956 aaPredicted RBP7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 C17orf99Q6UX52 265 aa7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 ERO1BQ86YB8 467 aa7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 TFIP11Q9UBB9 837 aaKnown RBP7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 CPA4Q9UI42 421 aa7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 GDF2Q9UK05 429 aaPredicted RBP7.53□□□□□ -1.2
NECTIN3-208ENST00000486596 RIPOR2Q9Y4F9 1068 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms