RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 SLC1A4P43007 532 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 USP17L24Q0WX57 530 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 RABEP1Q15276 862 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 SGMS1Q86VZ5 419 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 BRI3BPQ8WY22 251 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 GMCL1Q96IK5 515 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 LY9Q9HBG7 655 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 PDRG1Q9NUG6 133 aa26.69■■□□□ 1.86
NBPF3-212ENST00000486229 NDUFB10O96000 172 aa26.68■■□□□ 1.86
NBPF3-212ENST00000486229 VCAM1P19320 739 aa26.68■■□□□ 1.86
NBPF3-212ENST00000486229 HOXA7P31268 230 aaPredicted RBP26.68■■□□□ 1.86
NBPF3-212ENST00000486229 ALDH8A1Q9H2A2 487 aaPredicted RBP26.68■■□□□ 1.86
NBPF3-212ENST00000486229 SLC12A7Q9Y666 1083 aa26.68■■□□□ 1.86
NBPF3-212ENST00000486229 DDAH1O94760 285 aa26.67■■□□□ 1.86
NBPF3-212ENST00000486229 GPATCH4Q5T3I0 446 aaKnown RBP26.67■■□□□ 1.86
NBPF3-212ENST00000486229 Q6ZUG5 572 aa26.67■■□□□ 1.86
NBPF3-212ENST00000486229 IFNL1Q8IU54 200 aa26.67■■□□□ 1.86
NBPF3-212ENST00000486229 GTF3C2Q8WUA4 911 aaPredicted RBP26.67■■□□□ 1.86
NBPF3-212ENST00000486229 MAP3K14Q99558 947 aa26.67■■□□□ 1.86
NBPF3-212ENST00000486229 UPF3BQ9BZI7 483 aaKnown RBP26.67■■□□□ 1.86
NBPF3-212ENST00000486229 BMP3P12645 472 aa26.66■■□□□ 1.86
NBPF3-212ENST00000486229 RCAN1P53805 252 aa26.66■■□□□ 1.86
NBPF3-212ENST00000486229 IRX3P78415 501 aaPredicted RBP26.66■■□□□ 1.86
NBPF3-212ENST00000486229 NKX2-3Q8TAU0 364 aa26.66■■□□□ 1.86
NBPF3-212ENST00000486229 PARK7Q99497 189 aaKnown RBP26.66■■□□□ 1.86
NBPF3-212ENST00000486229 ISY1Q9ULR0 285 aaKnown RBP26.66■■□□□ 1.86
NBPF3-212ENST00000486229 BTBD19C9JJ37 291 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 KIF5BP33176 963 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 NEK4P51957 841 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 PPP2R5BQ15173 497 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 ASPRV1Q53RT3 343 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 SPICE1Q8N0Z3 855 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 CHURC1Q8WUH1 139 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 AGXT2Q9BYV1 514 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 TANGO6Q9C0B7 1094 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 RPAP3Q9H6T3 665 aaPredicted RBP26.65■■□□□ 1.86
NBPF3-212ENST00000486229 MYPNQ86TC9 1320 aa26.65■■□□□ 1.86
NBPF3-212ENST00000486229 PDHXO00330 501 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 ST18O60284 1047 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 PARP1P09874 1014 aaKnown RBP26.64■■□□□ 1.86
NBPF3-212ENST00000486229 MOGSQ13724 837 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 CCDC96Q2M329 555 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 FAM160B2Q86V87 743 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 ZNF654Q8IZM8 581 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 CTCFLQ8NI51 663 aaPredicted RBP26.64■■□□□ 1.86
NBPF3-212ENST00000486229 LRRC2Q9BYS8 371 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 HOXC10Q9NYD6 342 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 FEM1BQ9UK73 627 aa26.64■■□□□ 1.86
NBPF3-212ENST00000486229 PLA2G6O60733 806 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 FDX1P10109 184 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 GNAQP50148 359 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 DGKZQ13574 1117 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 CATSPERGQ6ZRH7 1159 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 BRF1Q92994 677 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 TCEANC2Q96MN5 208 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 ZIC5Q96T25 663 aa26.63■■□□□ 1.85
NBPF3-212ENST00000486229 SNHG28P0DPA3 235 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 PDHBP11177 359 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 CPA1P15085 419 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 COG2Q14746 738 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 FAM83BQ5T0W9 1011 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 GPAT2Q6NUI2 795 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 CHMP4CQ96CF2 233 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 ZFYVE28Q9HCC9 887 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 MTMR7Q9Y216 660 aa26.62■■□□□ 1.85
NBPF3-212ENST00000486229 CCDC196A0A1B0GTZ2 297 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 ZBTB43O43298 467 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 FLOT1O75955 427 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 STAT2P52630 851 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 IKQ13123 557 aaPredicted RBP26.61■■□□□ 1.85
NBPF3-212ENST00000486229 TAF1CQ15572 869 aaPredicted RBP26.61■■□□□ 1.85
NBPF3-212ENST00000486229 TREML2Q5T2D2 321 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 SMCR8Q8TEV9 937 aaPredicted RBP26.61■■□□□ 1.85
NBPF3-212ENST00000486229 NUP133Q8WUM0 1156 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 PTPN18Q99952 460 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 LZTS2Q9BRK4 669 aa26.61■■□□□ 1.85
NBPF3-212ENST00000486229 KLF18A0A0U1RQI7 1052 aa26.6■■□□□ 1.85
NBPF3-212ENST00000486229 IGF2BP3O00425 579 aaKnown RBP eCLIP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 GCLCP48506 637 aaPredicted RBP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 ZNF543Q08ER8 600 aa26.6■■□□□ 1.85
NBPF3-212ENST00000486229 TROAPQ12815 778 aa26.6■■□□□ 1.85
NBPF3-212ENST00000486229 FAM43AQ8N2R8 423 aa26.6■■□□□ 1.85
NBPF3-212ENST00000486229 PRPF38AQ8NAV1 312 aaKnown RBP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 RBM28Q9NW13 759 aaKnown RBP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 SAGE1Q9NXZ1 904 aa26.6■■□□□ 1.85
NBPF3-212ENST00000486229 NAP1L2Q9ULW6 460 aaPredicted RBP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 CTDP1Q9Y5B0 961 aaPredicted RBP26.6■■□□□ 1.85
NBPF3-212ENST00000486229 MCM2P49736 904 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 EVCP57679 992 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 GRM4Q14833 912 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 APOA5Q6Q788 366 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 MB21D1Q8N884 522 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 SLF1Q9BQI6 1058 aa26.59■■□□□ 1.85
NBPF3-212ENST00000486229 ASCC2Q9H1I8 757 aaPredicted RBP26.59■■□□□ 1.85
NBPF3-212ENST00000486229 TMEM232C9JQI7 657 aa26.58■■□□□ 1.85
NBPF3-212ENST00000486229 ZNF274Q96GC6 653 aaPredicted RBP26.58■■□□□ 1.85
NBPF3-212ENST00000486229 KIF2CQ99661 725 aa26.58■■□□□ 1.85
NBPF3-212ENST00000486229 CFHR5Q9BXR6 569 aa26.58■■□□□ 1.85
NBPF3-212ENST00000486229 PNMA2Q9UL42 364 aa26.58■■□□□ 1.85
NBPF3-212ENST00000486229 APOBRQ0VD83 1088 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms