RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CCNA1P78396 465 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 RAB30Q15771 203 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 MFSD5Q6N075 450 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 SLC44A5Q8NCS7 719 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 LPIN2Q92539 896 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 TOX2Q96NM4 488 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 CWC22Q9HCG8 908 aaKnown RBP10.32□□□□□ -0.76
XRN1-212ENST00000486211 MROH7-TTC4A0A0A0MT08 1334 aa10.32□□□□□ -0.76
XRN1-212ENST00000486211 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 A0A1W2PQ45 241 aaPredicted RBP10.31□□□□□ -0.76
XRN1-212ENST00000486211 A0A1W2PQY0 241 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 USP17L10C9JJH3 530 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 PPIGQ13427 754 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■□□□ 13.2
XRN1-212ENST00000486211 PRAMEF19Q5SWL8 479 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 WDR78Q5VTH9 848 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 IRX2Q9BZI1 471 aaPredicted RBP10.31□□□□□ -0.76
XRN1-212ENST00000486211 SLC28A3Q9HAS3 691 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 BTBD7Q9P203 1132 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
XRN1-212ENST00000486211 HERC5Q9UII4 1024 aaKnown RBP10.31□□□□□ -0.76
XRN1-212ENST00000486211 MSRAQ9UJ68 235 aa10.31□□□□□ -0.76
XRN1-212ENST00000486211 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
XRN1-212ENST00000486211 ASNSP08243 561 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 CSF2RAP15509 400 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 POU3F3P20264 500 aaPredicted RBP10.3□□□□□ -0.76
XRN1-212ENST00000486211 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
XRN1-212ENST00000486211 LBX2Q6XYB7 198 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 ZNF365Q70YC5 407 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 DZIP1Q86YF9 867 aaKnown RBP10.3□□□□□ -0.76
XRN1-212ENST00000486211 FBXL18Q96ME1 805 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 DNAJC18Q9H819 358 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 DENND2AQ9ULE3 1009 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 MTCH2Q9Y6C9 303 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 IVNS1ABPQ9Y6Y0 642 aa10.3□□□□□ -0.76
XRN1-212ENST00000486211 PRRC2BQ5JSZ5 2229 aaKnown RBP10.3□□□□□ -0.76
XRN1-212ENST00000486211 SEMA3EO15041 775 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 COBLO75128 1261 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 VAMP4O75379 141 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 ACRP10323 421 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 ADORA2AP29274 412 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 PHKA1P46020 1223 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 C12orf42Q96LP6 360 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 COG5Q9UP83 839 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
XRN1-212ENST00000486211 ROBO3Q96MS0 1386 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 PGK1P00558 417 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
XRN1-212ENST00000486211 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
XRN1-212ENST00000486211 CCDC174Q6PII3 467 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 CATSPERGQ6ZRH7 1159 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 ATG9AQ7Z3C6 839 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 DPP9Q86TI2 863 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 METTL16Q86W50 562 aaKnown RBP10.28□□□□□ -0.76
XRN1-212ENST00000486211 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 ZGPATQ8N5A5 531 aaKnown RBP10.28□□□□□ -0.76
XRN1-212ENST00000486211 SRCIN1Q9C0H9 1055 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 GNL3LQ9NVN8 582 aaKnown RBP10.28□□□□□ -0.76
XRN1-212ENST00000486211 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 TRANK1O15050 2925 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 SMCHD1A6NHR9 2005 aa10.28□□□□□ -0.76
XRN1-212ENST00000486211 USP17L15C9J2P7 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L13C9JLJ4 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L11C9JVI0 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L18D6R9N7 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L22D6RA61 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L17D6RBQ6 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L19D6RCP7 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L20D6RJB6 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 EYA2O00167 538 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 GDF11O95390 407 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 MYOGP15173 224 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 RABGGTBP53611 331 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 MECOMQ03112 1051 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 USP17L24Q0WX57 530 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 KRT40Q6A162 431 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 GINM1Q9NU53 330 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 PI4KBQ9UBF8 816 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 PDS5AQ29RF7 1337 aaKnown RBP10.27□□□□□ -0.77
XRN1-212ENST00000486211 A0A0G2JMZ2 1700 aa10.27□□□□□ -0.77
XRN1-212ENST00000486211 WDFY4Q6ZS81 3184 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 RFXAPO00287 272 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 STRNO43815 780 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 ADAMTS4O75173 837 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 MAP4K4O95819 1239 aaPredicted RBP10.26□□□□□ -0.77
XRN1-212ENST00000486211 RARBP10826 455 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 RASGRF1Q13972 1273 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 NBR1Q14596 966 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 ATP2B3Q16720 1220 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 RNF180Q86T96 592 aa10.26□□□□□ -0.77
XRN1-212ENST00000486211 PACS2Q86VP3 889 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms