RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
MCF2L-226ENST00000486210 TTYH1Q9H313 450 aaPredicted RBP21.1■□□□□ 0.97
MCF2L-226ENST00000486210 PDLIM7Q9NR12 457 aa21.1■□□□□ 0.97
MCF2L-226ENST00000486210 CHGBP05060 677 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 ERCC3P19447 782 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 SLFNL1Q499Z3 407 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 KIAA1755Q5JYT7 1200 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 ARRDC4Q8NCT1 418 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 PRDM5Q9NQX1 630 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-226ENST00000486210 SMCHD1A6NHR9 2005 aa21.09■□□□□ 0.97
MCF2L-226ENST00000486210 TRIM43BA6NCK2 446 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 KBTBD13C9JR72 458 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 SEPT4O43236 478 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 COG2Q14746 738 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 PRAMEF19Q5SWL8 479 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 MAFAQ8NHW3 353 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-226ENST00000486210 TRIM43Q96BQ3 446 aaPredicted RBP21.08■□□□□ 0.97
MCF2L-226ENST00000486210 SPATC1LQ9H0A9 340 aa21.08■□□□□ 0.97
MCF2L-226ENST00000486210 COL11A1P12107 1806 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-226ENST00000486210 MAGEB6P1A0A0J9YX57 407 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 TRIM6-TRIM34B2RNG4 842 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 STRNO43815 780 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 KBTBD3Q8NAB2 608 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 SHCBP1Q8NEM2 672 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 MYLIPQ8WY64 445 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 CRNKL1Q9BZJ0 848 aaKnown RBP21.07■□□□□ 0.96
MCF2L-226ENST00000486210 MYH8P13535 1937 aa21.07■□□□□ 0.96
MCF2L-226ENST00000486210 PRUNE2Q8WUY3 3088 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-226ENST00000486210 ITGB8P26012 769 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 SMAD3P84022 425 aaKnown RBP21.06■□□□□ 0.96
MCF2L-226ENST00000486210 LRRC41Q15345 812 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 FAM47AQ5JRC9 791 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 RILPL2Q969X0 211 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 FERMT2Q96AC1 680 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 EVI5LQ96CN4 794 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 HOXC10Q9NYD6 342 aa21.06■□□□□ 0.96
MCF2L-226ENST00000486210 MYCNP04198 464 aaPredicted RBP21.05■□□□□ 0.96
MCF2L-226ENST00000486210 PDE6AP16499 860 aa21.05■□□□□ 0.96
MCF2L-226ENST00000486210 SLC9C2Q5TAH2 1124 aa21.05■□□□□ 0.96
MCF2L-226ENST00000486210 TANGO6Q9C0B7 1094 aa21.05■□□□□ 0.96
MCF2L-226ENST00000486210 PLXNA1Q9UIW2 1896 aa21.05■□□□□ 0.96
MCF2L-226ENST00000486210 TCRBV5S4A2TA0A5A2 114 aa21.04■□□□□ 0.96
MCF2L-226ENST00000486210 SDSP20132 328 aa21.04■□□□□ 0.96
MCF2L-226ENST00000486210 DSG3P32926 999 aa21.04■□□□□ 0.96
MCF2L-226ENST00000486210 MAML3Q96JK9 1138 aa21.04■□□□□ 0.96
MCF2L-226ENST00000486210 FSD1Q9BTV5 496 aa21.04■□□□□ 0.96
MCF2L-226ENST00000486210 MPHOSPH10O00566 681 aaKnown RBP21.03■□□□□ 0.96
MCF2L-226ENST00000486210 ADD2P35612 726 aa21.03■□□□□ 0.96
MCF2L-226ENST00000486210 SIAH1Q8IUQ4 282 aa21.03■□□□□ 0.96
MCF2L-226ENST00000486210 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
MCF2L-226ENST00000486210 ATG4CQ96DT6 458 aa21.03■□□□□ 0.96
MCF2L-226ENST00000486210 ZNF532Q9HCE3 1301 aa21.03■□□□□ 0.96
MCF2L-226ENST00000486210 EPHB4P54760 987 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 TLE2Q04725 743 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 NCAPG2Q86XI2 1143 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 CLEC10AQ8IUN9 316 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 ABRAQ8N0Z2 381 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 MB21D1Q8N884 522 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.02■□□□□ 0.96
MCF2L-226ENST00000486210 MROH8Q9H579 483 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 MCM9Q9NXL9 1143 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 PHF24Q9UPV7 400 aa21.02■□□□□ 0.96
MCF2L-226ENST00000486210 CYP2D6P10635 497 aa21.01■□□□□ 0.95
MCF2L-226ENST00000486210 PLS1Q14651 629 aa21.01■□□□□ 0.95
MCF2L-226ENST00000486210 SDR42E1Q8WUS8 393 aa21.01■□□□□ 0.95
MCF2L-226ENST00000486210 SLC5A4Q9NY91 659 aa21.01■□□□□ 0.95
MCF2L-226ENST00000486210 BAZ2AQ9UIF9 1905 aaKnown RBP21.01■□□□□ 0.95
MCF2L-226ENST00000486210 RNF113AO15541 343 aaKnown RBP21■□□□□ 0.95
MCF2L-226ENST00000486210 FLOT1O75955 427 aa21■□□□□ 0.95
MCF2L-226ENST00000486210 FOSL2P15408 326 aa21■□□□□ 0.95
MCF2L-226ENST00000486210 BMP2KLQ5H9B9 411 aa21■□□□□ 0.95
MCF2L-226ENST00000486210 TMEM179Q6ZVK1 233 aa21■□□□□ 0.95
MCF2L-226ENST00000486210 SPICE1Q8N0Z3 855 aa21■□□□□ 0.95
MCF2L-226ENST00000486210 DCP1AQ9NPI6 582 aaPredicted RBP21■□□□□ 0.95
MCF2L-226ENST00000486210 TMEM132BQ14DG7 1078 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 UBE3CQ15386 1083 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 ZSCAN25Q6NSZ9 544 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 AMOTL1Q8IY63 956 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 DYNLL2Q96FJ2 89 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 XPNPEP3Q9NQH7 507 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 TMX2Q9Y320 296 aa20.99■□□□□ 0.95
MCF2L-226ENST00000486210 SMIM22K7EJ46 135 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 CLTBP09497 229 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 AKR1B1P15121 316 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 TAL1P17542 331 aaPredicted RBP20.98■□□□□ 0.95
MCF2L-226ENST00000486210 OSBP2Q969R2 916 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 DDRGK1Q96HY6 314 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 RNPC3Q96LT9 517 aaKnown RBP20.98■□□□□ 0.95
MCF2L-226ENST00000486210 SEC62Q99442 399 aaKnown RBP20.98■□□□□ 0.95
MCF2L-226ENST00000486210 VCPKMTQ9H867 229 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 PRDM6Q9NQX0 595 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 TACC3Q9Y6A5 838 aa20.98■□□□□ 0.95
MCF2L-226ENST00000486210 TMEM265A0A087WTH1 108 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 KIAA0355O15063 1070 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 PGK1P00558 417 aa20.97■□□□□ 0.95
MCF2L-226ENST00000486210 PGK2P07205 417 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms