RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 TMEM179Q6ZVK1 233 aa14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 MKNK2Q9HBH9 465 aa14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 MTMR10Q9NXD2 777 aa14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
HLA-DOA-204ENST00000485901 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 SEPT2Q15019 361 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 VPS53Q5VIR6 699 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 LPAR1Q92633 364 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 PORCNQ9H237 461 aa14.25□□□□□ -0.13
HLA-DOA-204ENST00000485901 HSPD1P10809 573 aaKnown RBP14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 AKR1B1P15121 316 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 PTPREP23469 700 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 PDE4BQ07343 736 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 PPARAQ07869 468 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 ZNF589Q86UQ0 364 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 STK11IPQ8N1F8 1099 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 RUFY2Q8WXA3 655 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 FEZ1Q99689 392 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 CWC22Q9HCG8 908 aaKnown RBP14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 HOXC10Q9NYD6 342 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 IVNS1ABPQ9Y6Y0 642 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 UNC80Q8N2C7 3258 aa14.24□□□□□ -0.13
HLA-DOA-204ENST00000485901 BAZ2AQ9UIF9 1905 aaKnown RBP14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 DNM1LO00429 736 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 FOXP2O15409 715 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 IGHA2P01877 340 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 FGAP02671 866 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 GRB14Q14449 540 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 DDX20Q9UHI6 824 aaKnown RBP14.23□□□□□ -0.13
HLA-DOA-204ENST00000485901 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 SYN1P17600 705 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 RASA1P20936 1047 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 CCND3P30281 292 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 LRRC26Q2I0M4 334 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 OLFML2BQ68BL8 750 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 POTEEQ6S8J3 1075 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 MB21D1Q8N884 522 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ARRDC4Q8NCT1 418 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 SHCBP1Q8NEM2 672 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ACER1Q8TDN7 264 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 LBHD1Q9BQE6 289 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ARHGEF10LQ9HCE6 1279 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ANAPC4Q9UJX5 808 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 ZNF236Q9UL36 1845 aa14.22□□□□□ -0.13
HLA-DOA-204ENST00000485901 CNMDO75829 334 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 VCAM1P19320 739 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 CHMLP26374 656 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 ICA1Q05084 483 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 CCL14Q16627 93 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 ABRAQ8N0Z2 381 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 SH2D4AQ9H788 454 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 PRKAG2Q9UGJ0 569 aa14.21□□□□□ -0.13
HLA-DOA-204ENST00000485901 RLFQ13129 1914 aa14.21□□□□□ -0.14
HLA-DOA-204ENST00000485901 ZMYM6O95789 1325 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 PRDM1O75626 825 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 COG2Q14746 738 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 ZYXQ15942 572 aaKnown RBP14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 NRBP1Q9UHY1 535 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
HLA-DOA-204ENST00000485901 RAD50Q92878 1312 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 A0A1W2PRG0 241 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 ZNF213O14771 459 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 TSPY3P0CV98 308 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 TSPY8P0CW00 308 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 TFAP4Q01664 338 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 BMP2KLQ5H9B9 411 aa14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 SENP6Q9GZR1 1112 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 ZNFX1Q9P2E3 1918 aaKnown RBP14.19□□□□□ -0.14
HLA-DOA-204ENST00000485901 FGRP09769 529 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 CYBAP13498 195 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 PPP4R3BQ5MIZ7 849 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 SKAP1Q86WV1 359 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 NEDD1Q8NHV4 660 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 MROH8Q9H579 483 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 NYAP2Q9P242 653 aa14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
HLA-DOA-204ENST00000485901 TSPY2A6NKD2 308 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 SEPT4O43236 478 aa14.17□□□□□ -0.14
HLA-DOA-204ENST00000485901 ORC4O43929 436 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms