RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 IL25Q9H293 177 aa17.77■□□□□ 0.44
YIF1A-208ENST00000485820 BRCA2P51587 3418 aa17.77■□□□□ 0.43
YIF1A-208ENST00000485820 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.43
YIF1A-208ENST00000485820 A0A0G2JMZ2 1700 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 TSPY2A6NKD2 308 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 RAD21O60216 631 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
YIF1A-208ENST00000485820 GJB1P08034 283 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 PTPREP23469 700 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 NOVP48745 357 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 HAND2P61296 217 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 GMCL1P1Q8NEA9 526 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 SOCS4Q8WXH5 440 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 UNC93B1Q9H1C4 597 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 PPP1R9AQ9ULJ8 1098 aa17.76■□□□□ 0.43
YIF1A-208ENST00000485820 ZNFX1Q9P2E3 1918 aaKnown RBP17.76■□□□□ 0.43
YIF1A-208ENST00000485820 NMT2O60551 498 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 MAP2K5Q13163 448 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 TMEM132BQ14DG7 1078 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 LRRC47Q8N1G4 583 aaKnown RBP17.75■□□□□ 0.43
YIF1A-208ENST00000485820 SHCBP1Q8NEM2 672 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 NKX2-3Q8TAU0 364 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 TRIB2Q92519 343 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 DSCC1Q9BVC3 393 aa17.75■□□□□ 0.43
YIF1A-208ENST00000485820 TNRC18O15417 2968 aaPredicted RBP17.75■□□□□ 0.43
YIF1A-208ENST00000485820 SLC15A5A6NIM6 579 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 VWA5AO00534 786 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 CHMLP26374 656 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 GJA8P48165 433 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 TRIM32Q13049 653 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 AKNAD1Q5T1N1 836 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 SLFN13Q68D06 897 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
YIF1A-208ENST00000485820 REPS2Q8NFH8 660 aa17.74■□□□□ 0.43
YIF1A-208ENST00000485820 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 ZNF213O14771 459 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 STRNO43815 780 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 HMGCRP04035 888 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
YIF1A-208ENST00000485820 ERCC3P19447 782 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 RGS2P41220 211 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 GRB14Q14449 540 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 CCL14Q16627 93 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
YIF1A-208ENST00000485820 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 WDR78Q5VTH9 848 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 PRPF38AQ8NAV1 312 aaKnown RBP17.73■□□□□ 0.43
YIF1A-208ENST00000485820 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 PAK6Q9NQU5 681 aaPredicted RBP17.73■□□□□ 0.43
YIF1A-208ENST00000485820 TCP11L1Q9NUJ3 509 aa17.73■□□□□ 0.43
YIF1A-208ENST00000485820 SGPL1O95470 568 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 HOXC6P09630 235 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 PLS1Q14651 629 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 CENPQQ7L2Z9 268 aaPredicted RBP17.72■□□□□ 0.43
YIF1A-208ENST00000485820 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
YIF1A-208ENST00000485820 SHISA4Q96DD7 197 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 MROH8Q9H579 483 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 CWC22Q9HCG8 908 aaKnown RBP17.72■□□□□ 0.43
YIF1A-208ENST00000485820 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 FEM1BQ9UK73 627 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 ZNF214Q9UL59 606 aaPredicted RBP17.72■□□□□ 0.43
YIF1A-208ENST00000485820 STX8Q9UNK0 236 aa17.72■□□□□ 0.43
YIF1A-208ENST00000485820 BMP3P12645 472 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 STAT3P40763 770 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 MAP3K21Q5TCX8 1036 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 RIOX2Q8IUF8 465 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 NPLOC4Q8TAT6 608 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 GMCL1Q96IK5 515 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 IVNS1ABPQ9Y6Y0 642 aa17.71■□□□□ 0.43
YIF1A-208ENST00000485820 RPTORQ8N122 1335 aa17.71■□□□□ 0.42
YIF1A-208ENST00000485820 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
YIF1A-208ENST00000485820 SLC25A27O95847 323 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 IGHA2P01877 340 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 MCCP23508 829 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 NCAPG2Q86XI2 1143 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 U2AF1L4Q8WU68 220 aaKnown RBP17.7■□□□□ 0.42
YIF1A-208ENST00000485820 RUFY2Q8WXA3 655 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 APBA2Q99767 749 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 RNF41Q9H4P4 317 aaPredicted RBP17.7■□□□□ 0.42
YIF1A-208ENST00000485820 HMX1Q9NP08 348 aaPredicted RBP17.7■□□□□ 0.42
YIF1A-208ENST00000485820 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
YIF1A-208ENST00000485820 ATP2A1O14983 1001 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 COBLO75128 1261 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 ZKSCAN1P17029 563 aaPredicted RBP17.69■□□□□ 0.42
YIF1A-208ENST00000485820 ADORA2AP29274 412 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 CACNB2Q08289 660 aaPredicted RBP17.69■□□□□ 0.42
YIF1A-208ENST00000485820 RCSD1Q6JBY9 416 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 ABRAQ8N0Z2 381 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 TTC14Q96N46 770 aa17.69■□□□□ 0.42
YIF1A-208ENST00000485820 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms