RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GSK3AP49840 483 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TEFQ10587 303 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ERCC6LQ2NKX8 1250 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 CWF19L2Q2TBE0 894 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ARHGAP29Q52LW3 1261 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 PLEKHO1Q53GL0 409 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TNNI3KQ59H18 835 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF530Q6P9A1 599 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 FIGNL1Q6PIW4 674 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TRIM65Q6PJ69 517 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TMCO3Q6UWJ1 677 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 SYT10Q6XYQ8 523 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TMC6Q7Z403 805 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 PODNQ7Z5L7 613 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 IQUBQ8NA54 791 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 KBTBD3Q8NAB2 608 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TSEN2Q8NCE0 465 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LINC00301Q8NCQ3 95 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LRRN4CLQ8ND94 238 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 DDX11Q96FC9 970 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 DNAJC2Q99543 621 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 MPHOSPH8Q99549 860 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 FTOQ9C0B1 505 aaKnown RBP eCLIP5.4□□□□□ -1.546e-7■■□□□ 12.1
SMARCC1-206ENST00000485737 ZCCHC2Q9C0B9 1178 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 CCDC8Q9H0W5 538 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TSPAN10Q9H1Z9 355 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 BOLA2Q9H3K6 86 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LGR6Q9HBX8 967 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 GPR108Q9NPR9 543 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 LRRC4BQ9NT99 713 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TRMT1Q9NXH9 659 aaKnown RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ZDHHC3Q9NYG2 299 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 IFNKQ9P0W0 207 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 TUBE1Q9UJT0 475 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 ATXN7L1Q9ULK2 861 aaPredicted RBP5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 PCDHA7Q9UN72 937 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 HPSEQ9Y251 543 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 AMOTL2Q9Y2J4 779 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 FPGT-TNNI3KV9GXZ4 949 aa5.4□□□□□ -1.54
SMARCC1-206ENST00000485737 WDR19Q8NEZ3 1342 aa5.4□□□□□ -1.55
SMARCC1-206ENST00000485737 COL22A1Q8NFW1 1626 aaPredicted RBP5.4□□□□□ -1.55
SMARCC1-206ENST00000485737 ABCC12Q96J65 1359 aa5.4□□□□□ -1.55
SMARCC1-206ENST00000485737 PARP4Q9UKK3 1724 aaKnown RBP5.4□□□□□ -1.55
SMARCC1-206ENST00000485737 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NEURL1BA8MQ27 555 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 KHNYNO15037 678 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ATXN7O15265 892 aaPredicted RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 FANCGO15287 622 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ZSCAN12O43309 604 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 SMC2O95347 1197 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ANXA1P04083 346 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 BCRP11274 1271 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 CAPN2P17655 700 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 CMA1P23946 247 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 PDIA3P30101 505 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NOS2P35228 1153 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 MAP2K3P46734 347 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NDUFA8P51970 172 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 EPHA4P54764 986 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 FANCCQ00597 558 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 UBAP2LQ14157 1087 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 GCKRQ14397 625 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ZMYM1Q5SVZ6 1142 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 TEX35Q5T0J7 233 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 AXDND1Q5T1B0 1012 aaPredicted RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NBPF6Q5VWK0 638 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 JAKMIP3Q5VZ66 844 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 GPAT2Q6NUI2 795 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 RSRC2Q7L4I2 434 aaKnown RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 TMEM139Q8IV31 216 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 VSTM4Q8IW00 320 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 REXO1L1PQ8IX06 675 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ELOA2Q8IYF1 753 aaPredicted RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ZNF295-AS1Q8N0V1 137 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 USHBP1Q8N6Y0 703 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 KCNH5Q8NCM2 988 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ANKRD24Q8TF21 1146 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ZDHHC1Q8WTX9 485 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 UBXN4Q92575 508 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ACDQ96AP0 544 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NBPF4Q96M43 638 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 OXCT2Q9BYC2 517 aaPredicted RBP5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 HSD3B7Q9H2F3 369 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 NEUROD4Q9HD90 331 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ST7Q9NRC1 585 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 PCDHGC4Q9Y5F7 938 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 MROH7-TTC4A0A0A0MT08 1334 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 C4AP0C0L4 1744 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 C4BP0C0L5 1744 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 TJP1Q07157 1748 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 ARFGEF2Q9Y6D5 1785 aa5.39□□□□□ -1.55
SMARCC1-206ENST00000485737 VWA3AA6NCI4 1184 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 E7EWF7 191 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 PIK3R2O00459 728 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 MSTNO14793 375 aa5.38□□□□□ -1.55
SMARCC1-206ENST00000485737 SPTLC2O15270 562 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms