RNA–Protein interactions for RNA: ENST00000485341.5

LSP1-216, Transcript of lymphocyte specific protein 1, humanhuman

TSL 2

Gene LSP1, Length 2,024 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-216ENST00000485341 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
LSP1-216ENST00000485341 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
LSP1-216ENST00000485341 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
LSP1-216ENST00000485341 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
LSP1-216ENST00000485341 LTBP3Q9NS15 1303 aa17.66■□□□□ 0.42
LSP1-216ENST00000485341 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 AKR1B1P15121 316 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 SHMT1P34896 483 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 RILPL1Q5EBL4 403 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 ARHGAP27Q6ZUM4 889 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 A0A087WWV3 80 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 BTBD18B2RXH4 712 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 DPCR1Q3MIW9 517 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 ZNF70Q9UC06 446 aaPredicted RBP17.65■□□□□ 0.42
LSP1-216ENST00000485341 NRBP1Q9UHY1 535 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 MTMR7Q9Y216 660 aa17.65■□□□□ 0.42
LSP1-216ENST00000485341 NEMFO60524 1076 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 HLA-DOAP06340 250 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 TPM4P67936 248 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
LSP1-216ENST00000485341 KRI1Q8N9T8 703 aaKnown RBP17.64■□□□□ 0.41
LSP1-216ENST00000485341 CEP95Q96GE4 821 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 TMEM47Q9BQJ4 181 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 KAT14Q9H8E8 782 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 EGFRP00533 1210 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 CALM1P0DP23 149 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 CALM2P0DP24 149 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 CALM3P0DP25 149 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 XBP1P17861 261 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 TNIP1Q15025 636 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 NBPF9Q3BBW0 867 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 CLEC10AQ8IUN9 316 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 PNMA1Q8ND90 353 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
LSP1-216ENST00000485341 KCNJ14Q9UNX9 436 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 SCAF8Q9UPN6 1271 aaKnown RBP17.64■□□□□ 0.41
LSP1-216ENST00000485341 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
LSP1-216ENST00000485341 hCG_1642624A0A1W2PR95 340 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 FZD9O00144 591 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 DYNC1I1O14576 645 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 DDAH1O94760 285 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 SHROOM1Q2M3G4 852 aaPredicted RBP17.63■□□□□ 0.41
LSP1-216ENST00000485341 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
LSP1-216ENST00000485341 SYT17Q9BSW7 474 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 DHX36Q9H2U1 1008 aaKnown RBP17.63■□□□□ 0.41
LSP1-216ENST00000485341 PI4KBQ9UBF8 816 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 TUBE1Q9UJT0 475 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 MYH6P13533 1939 aa17.63■□□□□ 0.41
LSP1-216ENST00000485341 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
LSP1-216ENST00000485341 FUT2Q10981 343 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 MYRIPQ8NFW9 859 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 VEZTQ9HBM0 779 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 CEP131Q9UPN4 1083 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 ENTPD3O75355 529 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 NT5C2P49902 561 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
LSP1-216ENST00000485341 LRMPQ12912 555 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 CCDC144BQ3MJ40 725 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 SPDYE2Q495Y8 402 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
LSP1-216ENST00000485341 SRBD1Q8N5C6 995 aaKnown RBP17.62■□□□□ 0.41
LSP1-216ENST00000485341 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 EHD4Q9H223 541 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 MYOZ2Q9NPC6 264 aa17.62■□□□□ 0.41
LSP1-216ENST00000485341 ZNF541Q9H0D2 1346 aa17.61■□□□□ 0.41
LSP1-216ENST00000485341 BIN1O00499 593 aa17.61■□□□□ 0.41
LSP1-216ENST00000485341 WNT10BO00744 389 aa17.61■□□□□ 0.41
LSP1-216ENST00000485341 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
LSP1-216ENST00000485341 GMPSP49915 693 aaPredicted RBP17.61■□□□□ 0.41
LSP1-216ENST00000485341 TOB1P50616 345 aaPredicted RBP17.61■□□□□ 0.41
LSP1-216ENST00000485341 CACTINQ8WUQ7 758 aaKnown RBP17.61■□□□□ 0.41
LSP1-216ENST00000485341 ZBED3Q96IU2 234 aaPredicted RBP17.61■□□□□ 0.41
LSP1-216ENST00000485341 KCNH3Q9ULD8 1083 aa17.61■□□□□ 0.41
LSP1-216ENST00000485341 MPHOSPH10O00566 681 aaKnown RBP17.6■□□□□ 0.41
LSP1-216ENST00000485341 IKBKBO14920 756 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
LSP1-216ENST00000485341 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 CDAN1Q8IWY9 1227 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 STAG2Q8N3U4 1231 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 MTMR14Q8NCE2 650 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
LSP1-216ENST00000485341 FAM13BQ9NYF5 915 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 TMOD2Q9NZR1 351 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
LSP1-216ENST00000485341 V9GY48 417 aaPredicted RBP17.6■□□□□ 0.41
LSP1-216ENST00000485341 ARFGEF1Q9Y6D6 1849 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 PTPREP23469 700 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 KRBA2Q6ZNG9 492 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 SAMD7Q7Z3H4 446 aa17.6■□□□□ 0.41
LSP1-216ENST00000485341 LRRC8AQ8IWT6 810 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms