RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 PRDM12Q9H4Q4 367 aa12.03□□□□□ -0.48
TRUB1-202ENST00000485065 PHF24Q9UPV7 400 aa12.03□□□□□ -0.48
TRUB1-202ENST00000485065 STRNO43815 780 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 CNMDO75829 334 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 RASIP1Q5U651 963 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 C12orf42Q96LP6 360 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 PBX4Q9BYU1 374 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 DHX36Q9H2U1 1008 aaKnown RBP12.02□□□□□ -0.49
TRUB1-202ENST00000485065 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 LDHCP07864 332 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 PI16Q6UXB8 463 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 ANKRD33Q7Z3H0 272 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 NECAB3Q96P71 396 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-202ENST00000485065 EPHX3Q9H6B9 360 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
TRUB1-202ENST00000485065 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
TRUB1-202ENST00000485065 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 TIMP1P01033 207 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 GSTO1P78417 241 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 MECOMQ03112 1051 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 RAB30Q15771 203 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
TRUB1-202ENST00000485065 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 DPP9Q86TI2 863 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 ALYREFQ86V81 257 aaKnown RBP12□□□□□ -0.49
TRUB1-202ENST00000485065 FOXP4Q8IVH2 680 aaPredicted RBP12□□□□□ -0.49
TRUB1-202ENST00000485065 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 FERMT2Q96AC1 680 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
TRUB1-202ENST00000485065 HMG20BQ9P0W2 317 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 NRBP1Q9UHY1 535 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
TRUB1-202ENST00000485065 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 ERC2O15083 957 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 IGFBP4P22692 258 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRUB1-202ENST00000485065 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRUB1-202ENST00000485065 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 TMEM240Q5SV17 173 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 WDR78Q5VTH9 848 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 CEP85Q6P2H3 762 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 CATSPERGQ6ZRH7 1159 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 SIRT2Q8IXJ6 389 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 HERVK_113Q902F9 699 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 NEUROD6Q96NK8 337 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 GPHNQ9NQX3 736 aaPredicted RBP11.99□□□□□ -0.49
TRUB1-202ENST00000485065 SLC5A4Q9NY91 659 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 MSRAQ9UJ68 235 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
TRUB1-202ENST00000485065 DCDC2CA8MYV0 355 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 ARID4AP29374 1257 aaPredicted RBP11.98□□□□□ -0.49
TRUB1-202ENST00000485065 MCAMP43121 646 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 JAG1P78504 1218 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 DSG2Q14126 1118 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 RNF180Q86T96 592 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
TRUB1-202ENST00000485065 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
TRUB1-202ENST00000485065 GPR108Q9NPR9 543 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 ZBTB21Q9ULJ3 1066 aa11.98□□□□□ -0.49
TRUB1-202ENST00000485065 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 POU3F3P20264 500 aaPredicted RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 ADORA2AP29274 412 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 USP14P54578 494 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 FAM47AQ5JRC9 791 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 C20orf194Q5TEA3 1177 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 ABRAQ8N0Z2 381 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 SPATA5Q8NB90 893 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 SHCBP1Q8NEM2 672 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 NSUN4Q96CB9 384 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 EAF2Q96CJ1 260 aaPredicted RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
TRUB1-202ENST00000485065 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 C11orf16Q9NQ32 467 aa11.97□□□□□ -0.49
TRUB1-202ENST00000485065 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms