RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RCAN3Q9UKA8 241 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 MROH7-TTC4A0A0A0MT08 1334 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 AOX1Q06278 1338 aa7.52□□□□□ -1.21
PTCD3-215ENST00000484203 SSC5DA1L4H1 1573 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 CCL15-CCL14A0A0B4J2E2 113 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 PIK3CDO00329 1044 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 CXCL11O14625 94 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 CTNND1O60716 968 aaKnown RBP7.51□□□□□ -1.21
PTCD3-215ENST00000484203 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 BMP1P13497 986 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 BTDP43251 543 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 RGS3P49796 1198 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 SP3Q02447 781 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 MAP3K10Q02779 954 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 MECOMQ03112 1051 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 KIF22Q14807 665 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 CCL15Q16663 113 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
PTCD3-215ENST00000484203 NSUN4Q96CB9 384 aaKnown RBP7.51□□□□□ -1.21
PTCD3-215ENST00000484203 DHX36Q9H2U1 1008 aaKnown RBP7.51□□□□□ -1.21
PTCD3-215ENST00000484203 SENP2Q9HC62 589 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 ATP13A2Q9NQ11 1180 aa7.51□□□□□ -1.21
PTCD3-215ENST00000484203 PSME4Q14997 1843 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 LILRA1O75019 489 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 UPP2O95045 317 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 RLBP1P12271 317 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 SKIP12755 728 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 ADD1P35611 737 aaKnown RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 PRMT2P55345 433 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 MLLT1Q03111 559 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 TCP10Q12799 353 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 MAP3K12Q12852 859 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 NFIAQ12857 509 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 TAF1CQ15572 869 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 NAA16Q6N069 864 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 MRPL14Q6P1L8 145 aaKnown RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 CEP85Q6P2H3 762 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 TREML4Q6UXN2 200 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 MIGA2Q7L4E1 593 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 ANKRD23Q86SG2 305 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 CLASRPQ8N2M8 674 aaKnown RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 MEIOBQ8N635 442 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 PLPP7Q8NBV4 271 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 BRI3BPQ8WY22 251 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 KIF1BPQ96EK5 621 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 HERC5Q9UII4 1024 aaKnown RBP7.5□□□□□ -1.21
PTCD3-215ENST00000484203 FZD1Q9UP38 647 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 KCNH4Q9UQ05 1017 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
PTCD3-215ENST00000484203 TLR2O60603 784 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 HOXD10P28358 340 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 MCAMP43121 646 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 SCTRP47872 440 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 CRHR2Q13324 411 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 MAP7D1Q3KQU3 841 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 Q6ZVU0 165 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 NBPF11Q86T75 865 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 FOXP4Q8IVH2 680 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-215ENST00000484203 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 ZKSCAN4Q969J2 545 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-215ENST00000484203 PARK7Q99497 189 aaKnown RBP7.49□□□□□ -1.21
PTCD3-215ENST00000484203 PTPN18Q99952 460 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 OSBPL5Q9H0X9 879 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-215ENST00000484203 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 PI4KBQ9UBF8 816 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 TNNQ9UQP3 1299 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 SLC45A1Q9Y2W3 748 aa7.49□□□□□ -1.21
PTCD3-215ENST00000484203 ATRNL1Q5VV63 1379 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 IFIT2P09913 472 aaKnown RBP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 INPP5BP32019 993 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 RHBDL3P58872 404 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 ERVK-9P63128 1117 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 USP4Q13107 963 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 PABPC4Q13310 644 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 PICALMQ13492 652 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 C6orf118Q5T5N4 469 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 TRIM46Q7Z4K8 759 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 AACSQ86V21 672 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 TEX11Q8IYF3 940 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 PANK1Q8TE04 598 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 AGBL1Q96MI9 1066 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
PTCD3-215ENST00000484203 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 DBNLQ9UJU6 430 aaKnown RBP7.48□□□□□ -1.21
PTCD3-215ENST00000484203 TRIM17Q9Y577 477 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms